| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0276 |
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| Symbol | |
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| ID | 4438784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 309753 |
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| End bp | 311879 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639672135 |
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| Product | ATP-dependent Zn protease |
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| Protein accession | YP_814122 |
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| Protein GI | 116628950 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00629107 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.162688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATA GAAGAAATAG ACTGCTTTCT AACGGTCTTT TCTATATCAT AGTATTCGTG
ATCCTCTTGG CTGGAATCAA TTGGGCCGTA GGGGGCTCAG GTAGTAATGG TTCCACAGAA
AATATCCGTT ATTCTCAATT AGTAAAGGAT TTAAAAGCGG GTAAAGTCAA GAGTATCAAT
GTACAACCAT CAAATGGTGT ATATACGGTT ACTGGATCTT ATAAGAAAGC TCAAAAATCA
AAGAATCAAA ATAATACTGG ATTTGGACTT ATTCCAAGTT CACAAAGTAG TAGTGAAGTA
ACTCGTTTCA GTACTACGAT GCTTCAAAAT GACTCAATGG TTAAGACAGT TTCAGATCTT
GCTCAAAAGA GCGGAGCATC AATTTCTGGT CAGGGTGAAT CTCAATCTGG AACTTGGATT
TCTACCATTG TTATGCTTGT CCCAACTTTG ATTTTTATTG TCATGCTTTG GATGATGATG
AACCAAGGCG GACAGGGTCG TGGTGGCGGC ATGATGAACT TTGGAAAATC TCATGTTAAG
CCACAAGACC CAAGTAAAAA TAAGGTTAGA TTCTCAGATG TAGCTGGTGA AGAAGAAGAA
AAGCAAGAGT TAGTTGAAAT TGTTGAATTC TTAAAGAATC CAGCAAAATA TACTAAGCTA
GGTGCTAGAA TTCCAGCTGG TGTTCTTCTT GAGGGCCCTC CTGGTACTGG TAAAACTTTA
CTTGCTCGTG CGGTTGCTGG TGAAGCTGGC GTGCCATTCT ACTCAATTTC TGGTTCAGAC
TTTGTAGAAA TGTTCGTCGG TGTCGGTGCC TCTCGTGTAC GTGACTTATT TGAAACGGCT
AAGAAGAACG CCCCAAGTAT CATCTTTATC GATGAAATTG ATGCCGTTGG ACGTAAACGT
GGTAACGGCG TAAGTGGTGG TCATGATGAA AGAGAACAAA CTTTAAACCA ATTGTTGGTT
GAAATGGATG GTTTCGAAGG TGATGAAGGT GTCATTGTTA TGGCAGCTAC TAACCGTTCA
GATGTTCTTG ACCCGGCACT TCTTCGTCCT GGCCGTTTTG ACCGTAAGGT TTTAGTTGGT
CGTCCAGATG TTAAGGGACG TGAAGCTATC TTAAAGGTTC ATGCTAAGAA TAAGCCTTTA
GCTCCAGATG TCGACTTAAA AGAAGTAGCA CGCCAAACTC CTGGTTTTGT TGGTGCTGAT
CTTGAAAATG TTTTAAATGA AGCTGCTTTA GTTGCCGCTC GTCGTAATAA GACTGAAATT
ACAGCATCTG ATATTGATGA GGCAGAAGAC CGCGTTATTG CTGGACCAGC TAAGAAAGAC
ACTGTTATTT CTCCTGAAGA AAGAAAACGT GTTGCATACC ATGAAGCAGG ACACGCAATT
GTTGGTTTAG TCCTGAGCGA TTCTAGAACT GTTCGTAAAG TTACGATTGT ACCTAGAGGC
CGTGCTGGTG GATATAACAT TATGCTTCCA AAAGAGGATG AAAACATCAT CACTAAGAAG
CAATTAATGG AACAAGTTGC TGGTTTAATG GGTGGTCGTG CTGGTGAAGA AGTAGTTGTT
GGTGATAAAT CTACTGGTGC TTCAAACGAC TTTGAACAAG CTACTAACAT TGCTCGTGGT
ATGGTTACTC AATATGGTAT GACTGACGTT GGTATGACTG AACTTGAATC TCCAAGTATG
CAAGTACCTT ATGGAACTAA GCCATACAGT GAGGCTACAG CTGCTAAGAT TGATGAAGCT
GTTAAAGAAA TTCTTGATGA AGGTCACAAA CAAGCAGTTG ATATCATTAA GAGCCACCGT
GAAACTCATA AGATTATTGC AGAAGCATTG CTCAAGTATG AAACTTTAAA CGAAAAGCAA
ATTCTTTCAT TATTTAAGAC TGGTAAGATG CCAGAAAATG ATGAGAATGA ATTTCCAAGT
GAGTCCAAAG CTTCAACTTA TGAAGAAGCA AAAGCTGCAA TGGAAAAGAA GGATCAACAA
AGAGAAGAAA CTGAAAATAA GGATGACAAA GAAGACGTTC ATCCACTTCC TGATGATCAT
AAGAATATTG ACGATATTCC ACTTAACCCA CCATCTGAAA AGAAGAATTC TGACGAACAC
AATTCAGATG AAAACAAGGA TAAGTAA
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| Protein sequence | MKNRRNRLLS NGLFYIIVFV ILLAGINWAV GGSGSNGSTE NIRYSQLVKD LKAGKVKSIN
VQPSNGVYTV TGSYKKAQKS KNQNNTGFGL IPSSQSSSEV TRFSTTMLQN DSMVKTVSDL
AQKSGASISG QGESQSGTWI STIVMLVPTL IFIVMLWMMM NQGGQGRGGG MMNFGKSHVK
PQDPSKNKVR FSDVAGEEEE KQELVEIVEF LKNPAKYTKL GARIPAGVLL EGPPGTGKTL
LARAVAGEAG VPFYSISGSD FVEMFVGVGA SRVRDLFETA KKNAPSIIFI DEIDAVGRKR
GNGVSGGHDE REQTLNQLLV EMDGFEGDEG VIVMAATNRS DVLDPALLRP GRFDRKVLVG
RPDVKGREAI LKVHAKNKPL APDVDLKEVA RQTPGFVGAD LENVLNEAAL VAARRNKTEI
TASDIDEAED RVIAGPAKKD TVISPEERKR VAYHEAGHAI VGLVLSDSRT VRKVTIVPRG
RAGGYNIMLP KEDENIITKK QLMEQVAGLM GGRAGEEVVV GDKSTGASND FEQATNIARG
MVTQYGMTDV GMTELESPSM QVPYGTKPYS EATAAKIDEA VKEILDEGHK QAVDIIKSHR
ETHKIIAEAL LKYETLNEKQ ILSLFKTGKM PENDENEFPS ESKASTYEEA KAAMEKKDQQ
REETENKDDK EDVHPLPDDH KNIDDIPLNP PSEKKNSDEH NSDENKDK
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