Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0110 |
Symbol | |
ID | 4440482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | + |
Start bp | 123528 |
End bp | 124610 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 639671971 |
Product | multitransmembrane protein |
Protein accession | YP_813960 |
Protein GI | 116628788 |
COG category | [S] Function unknown |
COG ID | [COG5438] Predicted multitransmembrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000000000000156468 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAAAAAGA ATCAAAAAGT TTGGCTTAGT TTAACGACTT TAATTGTTGG CATAGTTTTT ACGGCAATTA CGTATTTTTC TACAACTTTT GCTAGCAAGC CAATTGCTGT AATTACCGAT AATCACATTC AAGACACGCT AATTAATAAA ACCAAAGACA ATTATGAAAA TAAAGATGAA GTTAGGCAAC AAATATTGCA TTTAAAAATC ATCTCAGGAA AATACCGAGG TAAGAGATTC GTTGTTACCA ATACCTACTC TCCTTCACAG GCTGTTTCAC AAAAATATCG TCCTCATCAA CGTGTGATTG TATCTTTTAT TAAAGAAAAG CCAAAATTAG TTGAACCTAA ACGTGATTGG GTAGTTGTCT TGAGCATGTT TTTGACTATT AGTCTGATCA TTTTAATCAC AGGAAAACAA GCCAGTTTAT TATTAATTTC AATGGTTTTG AATAGCATTA TTTTTTATTT TGTAATTAAA AATGATATTA AAGAAAATGG AACTAAAATT TTCTTAGTTT ATGGTATTGC GGCCATTTTG TTTACCCTTA TTTCCCTGAT AATTGTACAA GGCTTTAATC AGAAAATGAT TGTTACATTA TGCGCTACGC TTTTAGGAGT TTTTGTGTCG TTTGGAATTT TTTATTTAGT TATGAGGTTG ACACATGAAC ACGGGATTGA CTATGAAGCA GTTGATTATG CAACGCAAGA TCCGCGTGCG CTATTTTTAT CTCAGACCAT TTTAGGAGTT CTTGGAGCTG TAATGGATGA AGCGACTGAT ATCGTTTCAA GTCTTTATGC ATTAGCTAAG CATAAGGTTG ACTTAACTTT TAAGGAGTTA TTTCTTAGTG GCCGGACCTT AGGACAAGAA ATTATGGGGC CATTAATAAA TGTATTAGTA CTGATTTTTA TGGCCGAAGC GCTCCCTATG ACAATTTTGT ATCTAAGAGA TAATAATACT TTAGTTTATA CTTTTAAATA TACTCTTTCT TTAGGTGTAA TTCAGAGCTT AAGTTCAGCG ATAGGCATAG TTTTAACTGT GATTTTTGCC ACTCTTGCTA GTTCTGTCTT TTTAAAAAAA TAA
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Protein sequence | MKKNQKVWLS LTTLIVGIVF TAITYFSTTF ASKPIAVITD NHIQDTLINK TKDNYENKDE VRQQILHLKI ISGKYRGKRF VVTNTYSPSQ AVSQKYRPHQ RVIVSFIKEK PKLVEPKRDW VVVLSMFLTI SLIILITGKQ ASLLLISMVL NSIIFYFVIK NDIKENGTKI FLVYGIAAIL FTLISLIIVQ GFNQKMIVTL CATLLGVFVS FGIFYLVMRL THEHGIDYEA VDYATQDPRA LFLSQTILGV LGAVMDEATD IVSSLYALAK HKVDLTFKEL FLSGRTLGQE IMGPLINVLV LIFMAEALPM TILYLRDNNT LVYTFKYTLS LGVIQSLSSA IGIVLTVIFA TLASSVFLKK
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