Gene LGAS_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLGAS_0099 
Symbol 
ID4440506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus gasseri ATCC 33323 
KingdomBacteria 
Replicon accessionNC_008530 
Strand
Start bp111243 
End bp111905 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID639671960 
Productalpha/beta fold family hydrolase 
Protein accessionYP_813949 
Protein GI116628777 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.00000675213 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAGTAA AAGTTAATGG GGTTGAAATT TACTATCAGA AATTAGGTAA AGGACATCCC 
TTAATTTTGT TACATGGACA TCACCAAGAT GGTGGAATCT TCGATAAATT AGTTGCGCCG
CTTTCTCTCT ATTACACAGT TGTGGTCCCC GATATGCGAG GCCATGGTTT AAGTGAAGGA
GAAGCAAGCG AGCATTATCA AACTGAAGTT GAAGATTTAC GGGCTTTTAT TAGCGCGCTT
AAACTTGAAA AGCCTTATAT CTTAGGCTTT GGTTCGGGAG GCTTAGTTGC TCTTTCTTTG
GCCGCTCAAG CACCAGAATT AGTTTCTAAA ATAATTGTTG CTGGTACTTA CGTTAATGGA
AACGGCGTGA ATGCAAAGCA CATTGCGGCT AATACCATTC GAGGCTTTTT TAAGGGAGAT
CGTGACAGCA AAGTAGCTTT AAGAGAGAGT CATATTCCTG TTGAAACGTT AAAGCGAATT
AAGACGCCGA CCTTATGTGT AGTAGGTGAA AAGGATTGGG TTAAAGTTGA ACATGTTCGT
TGGTACAGTC AATTGCTTCC TAATTGTCGT TTAGTTTTAA TGCCTCGTCA GACGCATTAT
AGTTATGTTG TTCATAGTTT AAAATTATTA GATTTAATTA AAGATTTTTG TAAAGAGAGC
TAA
 
Protein sequence
MKVKVNGVEI YYQKLGKGHP LILLHGHHQD GGIFDKLVAP LSLYYTVVVP DMRGHGLSEG 
EASEHYQTEV EDLRAFISAL KLEKPYILGF GSGGLVALSL AAQAPELVSK IIVAGTYVNG
NGVNAKHIAA NTIRGFFKGD RDSKVALRES HIPVETLKRI KTPTLCVVGE KDWVKVEHVR
WYSQLLPNCR LVLMPRQTHY SYVVHSLKLL DLIKDFCKES