Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LGAS_0060 |
Symbol | |
ID | 4440449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus gasseri ATCC 33323 |
Kingdom | Bacteria |
Replicon accession | NC_008530 |
Strand | - |
Start bp | 76114 |
End bp | 76938 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639671921 |
Product | lipopolysaccharide biosynthesis glycosyltransferase |
Protein accession | YP_813912 |
Protein GI | 116628740 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.00709812 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTA TGTTTTGCGG CGATTCTCAT GCCGAAGATG GTATTTTAAT TACAACGCTG TCTTTACTAA AAAACACATC AACTCCCCTG CACTTTTACA TTTTGACGAT GCACGCAGAG GGATACACAG CTTTTAACCA ACAAGCTTTT AATCTAATTA AAAAATTGCT TAAAGAAAAA GATCCTAACA ATACTGCTGA ATTAATCGAT TGTACTGAAT TATTTAAAAA AGAACCTCCA CGCGCAAATA TGGAAACTCG TTTTACGCCA TATGCAATGC TGCGTCTCTT TGCGGACCAA CTGCCACAGA TTCCTGATCG TATCTTATAT TTAGACGATG ATATTATTGT GCGTAAAGAT ATTAGCGACT TTTATAATCA AGATCTAGCT AATATTGAAC TAGTCGGTGT TTTAGACTTC TGGGGGCGGT TCTTCTTTCA CAATATCCAT ACCCACAAGA CTTTTGATTA CCTAAACTCC GGCGTCTTGC TTCTTAACAT GGCTGAAATT AAAAAAACAC AATTATTTGC CAAAGTAAGA GAAAAAATGA GTGATAAAAA AATGCTTCTT CCAGATCAGT CTGCTCTAAA TAAACTTGCT ACTGAGAAGA AAATTGCTCC ACGTTGCTAC AATGAACAAT ATCGTTTACG ACCAGATACC AAAATTCAAC ATTTCACGAC TAGCTTTCGT TTTAAGCCAT ACTTCCATAC TTTAACTGTT AAACCATGGG ATATAGAGCG AGTGCACAGC GTCTTGAAAT TACATGAATA TGATGATTTA CTTAAGCAGT ACGTAGAGCT TAGGTCACAA TTAAAGCGGG CCTAG
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Protein sequence | MNIMFCGDSH AEDGILITTL SLLKNTSTPL HFYILTMHAE GYTAFNQQAF NLIKKLLKEK DPNNTAELID CTELFKKEPP RANMETRFTP YAMLRLFADQ LPQIPDRILY LDDDIIVRKD ISDFYNQDLA NIELVGVLDF WGRFFFHNIH THKTFDYLNS GVLLLNMAEI KKTQLFAKVR EKMSDKKMLL PDQSALNKLA TEKKIAPRCY NEQYRLRPDT KIQHFTTSFR FKPYFHTLTV KPWDIERVHS VLKLHEYDDL LKQYVELRSQ LKRA
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