| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_0004 |
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| Symbol | recF |
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| ID | 4438889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | + |
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| Start bp | 3242 |
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| End bp | 4366 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 639671866 |
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| Product | recombination protein F |
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| Protein accession | YP_813859 |
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| Protein GI | 116628687 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 2.60396e-25 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATCTCG CAAACTTTGA ATTGAAAGAC TTTAGGAATT TTAAAGAATT AAAAACAGAT
TTTGATCCTC ATGTAAATAT TTTTATTGGT CCGAATGCCC AAGGAAAAAC TAATTTACTT
GAGGCAATTT ATTTTTTAGC CCTAACACGA TCCCATCGAA CTAATAGCGA TAAAGAATTA
ATTCGCTTTG GCAGTAAATT TGCCGGTTTA CAAGGTCGAG TTCATAAAAG CCAACTGCAA
GTAGAGCTTA AATTACGTTT AACAGCTAAT GGAAAAAAGG CTTGGGTAAA TCGCTTGGAG
CAAAAGAAGC TTTCTGCTTA TGTTGGGCAA ATGAATGCAA TTTTGTTTTC TCCAGAAGAT
TTAGCCCTAG TTAAGGGAGC ACCATCTGTT AGACGGAGAT TTATGGATTT AGAGTTTGGG
CAGATTAATT CAGAATATCT ATATTTTTCA AGTCAGTATC GTCAGGTACT GCAACAGAGA
AACAATTATT TAAAGCAACT AAGCATCAAA AAAGCAAATG ATCAAGTTTT TTTAGATGTC
TTATCTGATC AGCTGGCAGG AATTGCAGCA GAGATAATAT CGCGAAGAAT AAAATACATC
AAAAAACTCA ATTCCTACGC TAAAGCTGCT CATAGCGAGA TTAGTGGTCA AGCTGAAAAA
TTGCAGATTT TTTACCGTCC ATCAGTTAAG GAAATTATCC CAGAGGATAA TGTAGAGACC
ATTTATCGAA AAGTTATTAC TAGTTATAAG AAAAATCGTC CTAATGAAAT TCGAAAGGGC
ACTACTCTAA GTGGCCCGCA TCGAGATGAC TTGGAGTTTT TAATTAATGA AAAAAATGCC
CATGATTTTG CATCTCAAGG ACAGCAACGG ACGATTTCTC TAAGCGTCAA GTTAGCCGAG
ATTCAATTAG TACATGAATT GACGCAAGAA TATCCAATTC TGTTATTAGA TGATGTGATG
AGTGAGTTAG ATCATCGAAG ACAGAGCCGT TTATTGAACT ATATTCATGG CAAAACGCAA
ACATTTATAA CAACGACAGA TTTAGAAGGT ATTTCTTGGG AAATCGTGAA GGAACCTAAG
GTTTATCACA TTTCTGCTGG AACGATCAGT GCAAAGGAGA GTTAA
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| Protein sequence | MYLANFELKD FRNFKELKTD FDPHVNIFIG PNAQGKTNLL EAIYFLALTR SHRTNSDKEL
IRFGSKFAGL QGRVHKSQLQ VELKLRLTAN GKKAWVNRLE QKKLSAYVGQ MNAILFSPED
LALVKGAPSV RRRFMDLEFG QINSEYLYFS SQYRQVLQQR NNYLKQLSIK KANDQVFLDV
LSDQLAGIAA EIISRRIKYI KKLNSYAKAA HSEISGQAEK LQIFYRPSVK EIIPEDNVET
IYRKVITSYK KNRPNEIRKG TTLSGPHRDD LEFLINEKNA HDFASQGQQR TISLSVKLAE
IQLVHELTQE YPILLLDDVM SELDHRRQSR LLNYIHGKTQ TFITTTDLEG ISWEIVKEPK
VYHISAGTIS AKES
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