| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1668 |
|---|
| Symbol | |
|---|
| ID | 4415202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 1587039 |
|---|
| End bp | 1588046 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639669832 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_811182 |
|---|
| Protein GI | 116491638 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00012495 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA ATAAAAGAGC GACAATCAAC GATGTTGCTG AAGTTGCCAG AGTTTCGATT
ACGACCGTCT CAAGATATGT GAACGGAAAA TACGGCAAAA TGTCAGCGAA AACGCGACAA
AAAATTCAGC AGGCCATTAA GGATGTCGAC TACCACGTTA ACCGCCAGGC TCAAATGTTG
AAAAGACAAA ACAGTCATTT AATTGGCGTT GTCGTAGCAG ATGTCGAGAA TTTTTTTTCA
TCTCTACTTT TTAAAGGTGC CGACCAAGTT CTATCCGACA TTGGTTTTCA AATTATTCTC
ATGAATTCCA ACAACTCGCA GCTAAAGGAG CAAAGACAAA TCGAACGCCT CTTGGAGCTG
CAGGTGGACG GTATAATCCT TCAGCCGATG GGGCAACTGG CCGTCGACTA TGAATTCTTA
AAAAAACAAA ATGTTCCGAC TGTAATCGTC GATCGGAAAA TAGAGCCGGA AATCTGGCCG
GAAATTGTCA CAGATAATTA TGAATGTTCC AAAAAACTCG GTGAACTAAT GCTCCAAATG
CAATATCCGC AAATTTTAAT TCTCAGTGAA AAAATTGACG AAAACACAGC CCGCCAAGAC
CGGTATAAGG CTCTCGATGA TTTGCAAAAA AACCATTCTT TTAATTTGGG TCTAATCGAA
ATCAAAGTAA CAAGTTCCGA TGACGATATT TTTGTTTCAC TAAAAAACAG AACAAACAAT
TTTAAAATAA AAACTGCCAT CTATGCCCTA AAGGGACCTC TCTTACTAAG ATTGATGAGA
GTCCTGACTC AAAGGCATAT AAGTGTTCCG GACCAAGTCG GACTGGCGGC TTTTGATGAT
TGGGAGTGGG CAAAACTCAC GCACCCCCTG ATCACAACCA TTCAGCAGAA TCCAAAATTA
ATAGGTTCAA CAGCAGCTAA TAAGCTCTTG GAAGAAATTC AGGAATCGGA AACGCAGGCA
AGTGTAATCA CTGTAAAAAG CCAATTGATG GTCGGGCATT CATTGTGA
|
|---|
| Protein sequence | MKNNKRATIN DVAEVARVSI TTVSRYVNGK YGKMSAKTRQ KIQQAIKDVD YHVNRQAQML
KRQNSHLIGV VVADVENFFS SLLFKGADQV LSDIGFQIIL MNSNNSQLKE QRQIERLLEL
QVDGIILQPM GQLAVDYEFL KKQNVPTVIV DRKIEPEIWP EIVTDNYECS KKLGELMLQM
QYPQILILSE KIDENTARQD RYKALDDLQK NHSFNLGLIE IKVTSSDDDI FVSLKNRTNN
FKIKTAIYAL KGPLLLRLMR VLTQRHISVP DQVGLAAFDD WEWAKLTHPL ITTIQQNPKL
IGSTAANKLL EEIQESETQA SVITVKSQLM VGHSL
|
|---|
| |