Gene OEOE_1438 details

Gene Information

• Locus tag: OEOE_1438
• Symbol: smpB
• ID: 4415907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: -
• Start bp: 1350807
• End bp: 1351274
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639669612
• Product: SsrA-binding protein
• Protein accession: YP_810964
• Protein GI: 116491420
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAAA AAGACAAACA TGATGATGCC CTGGCAAGAA ATCGGCGGGC ATCTTTCAAC 
TATTTTATTG GAGAAACTTA CGAAGCTGGC ATTCAGCTTA CGGGTACCGA AATTAAATCG 
GTTCGTCTTG GCCAAATTAC GATCGGAGAT GCTTATATTA CGGTTCGCGA CCAACAGGCC 
TTTTTAAACA ACGCGAATAT TTCTCCCTAC AAACAAGGCA ATCAATTTAA TGTCGATCCC 
TTGCGACGGC GTAAACTGCT TTTGCACAAA AAAGAAATCC TCGCACTGGA TCGAGCCGTT 
TCCAAAGAAG GAAAAACAAT CGTTCCTTTA CGGGTATATA TTGTTAAAGG TTTCGCCAAA 
ATATTAATTG CGATTGGGAC CGGTAAGAAA AATTATGATA AACGGCAAAC AATCAAAGAA 
CGTGATTTAA AACGGGAATT AGGCAAGAAT CTGAAGAATT TTCATTGA 

 

Protein sequence

MAKKDKHDDA LARNRRASFN YFIGETYEAG IQLTGTEIKS VRLGQITIGD AYITVRDQQA 
FLNNANISPY KQGNQFNVDP LRRRKLLLHK KEILALDRAV SKEGKTIVPL RVYIVKGFAK 
ILIAIGTGKK NYDKRQTIKE RDLKRELGKN LKNFH