| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1258 |
|---|
| Symbol | |
|---|
| ID | 4415449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 1175272 |
|---|
| End bp | 1176366 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639669440 |
|---|
| Product | Lon-like protease |
|---|
| Protein accession | YP_810797 |
|---|
| Protein GI | 116491253 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.383395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA AAACATTTGT AACAATTATT TCCAGCTTTA CCATTTTCAT GTTAATGATC
ATCGGCGTAT CTTTTTATTT GCTTTTACCA ATGAATGCTT ACGTGGAAAC GCCAGGACAG
GCGGATAATA TAAAACAGTT TATGACTGTT GCCGGCAAAC GCGATCGAAC AAAAGGTTCC
TTGCGACTTG TTTCGGTATA TTTATCCCAG GCAAATCATT TGGATTGGCT GATTAGTAAA
TTTAATGGCG CCTATTCGAT TGAAGCTAAG ACAGAAGTTC AAGGAAATGT TTCGAATAGT
GTTTACGAAG CAATCAGCAA ATATCAAATG AAGGAAGCGA TTCTATCGGC AGAAGAAGTT
GCTTTTAAAG CTGCTGGAAT GGCTGATAAA GTCAAATCCG AATATCGCGG AATTTATGTT
GCCAGCATCA CGAAAAAATC GCACTTTGCC AAGAAAATTA AAGTTGGCGA TACGATCACG
AAGGTTGATG GCAAACACTT TAACAATTCT GCCGGATATC AAAAATACCT AGCCGCTATG
CCGGTCGGGG AAAAGGTGAC TTTGACTGTT TTGCGGAATA ACAAAACGCT TGAAGTTTCC
GGAAAAACAA TTCATTTAGC AAATACAAAA GATAAAGAAT ATCCAAAAGG GAGGAGCGGA
ATTGGAATCG GTCTAGTTGA CGATGTGGAA GTTACTACCG ACCCGAAGGT TAAAGTCAAT
GTCGGTCAGA TTTCCGGACC CTCAGGCGGT TTGATGTTCA CTCTTCAACT GTATTCACAA
TTATCAGGCG ATAACATCAA AAAAGGTCGT AATATTTCCG GTACAGGGAC AATCGATGAT
CAAGGAAAAG TTGGCGAAAT TGGTGGTATC GATAAGAAAA TAATCGCTGC AAAGGAAGCT
GGTTCAACGG TTTTCTTTGT CCCGTATGTA AAAGCGACTA AGGCAAATCT TAAATTGGAT
GGTGGCCAGA CTAACTGGCA GGCAGCGCTT AAAGCACAAA AAGAGTATGC CCCGAAAATG
AAACTTGTTC CCATCCGGAA TTTTCAGGAT GCTCTTAATT ATTTGAAATA TGGAAAAGTT
ATAAAAACAA AGTAA
|
|---|
| Protein sequence | MKKKTFVTII SSFTIFMLMI IGVSFYLLLP MNAYVETPGQ ADNIKQFMTV AGKRDRTKGS
LRLVSVYLSQ ANHLDWLISK FNGAYSIEAK TEVQGNVSNS VYEAISKYQM KEAILSAEEV
AFKAAGMADK VKSEYRGIYV ASITKKSHFA KKIKVGDTIT KVDGKHFNNS AGYQKYLAAM
PVGEKVTLTV LRNNKTLEVS GKTIHLANTK DKEYPKGRSG IGIGLVDDVE VTTDPKVKVN
VGQISGPSGG LMFTLQLYSQ LSGDNIKKGR NISGTGTIDD QGKVGEIGGI DKKIIAAKEA
GSTVFFVPYV KATKANLKLD GGQTNWQAAL KAQKEYAPKM KLVPIRNFQD ALNYLKYGKV
IKTK
|
|---|
| |