| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_1168 |
|---|
| Symbol | |
|---|
| ID | 4415532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 1104544 |
|---|
| End bp | 1105980 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639669357 |
|---|
| Product | amino acid transporter |
|---|
| Protein accession | YP_810729 |
|---|
| Protein GI | 116491185 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | [TIGR00909] amino acid transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0306264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCT TTAGAAAAAA AGACGTCGGT GAGATTTTAA AACATTCGAC GCCTTTAAAA
AGGACTTTGC GAACGTGGGA TTTAACTTTC CTTGGTATCG GAGCAATTAT CGGTACCGGA
ATCTTCGTTC TAACCGGAAA GGGAGCGTTA ACAGCTGGAC CGGCAATCTC GGTATCATTT
CTGGTTGCGG CAATCTGCTG TGGCTTTGCC GGTCTCTGTT ACGCTGAATT TGCTTCAATG
GCACCAGTGG CCGGTTCGGC TTACACATAC TCTTACATCG CTTTTGGTGA GATTATTGCT
TTTATTATCG GTTGGGATTT AATTTTGGAG TATACATTAG GAGCGGCAAC CGTCTCTGTC
GGCTGGTCAG GATATTTCGC CAATTTGCTT GGCAATCTGG GAATTCATAT TCCGACCGTT
TTAACGGCAG CAGCTGGCAC AACCGCTGGC GTTACGAGCT ATTTTAATTT ACCAGCCTTT
TTAATTGTTT TATTGATTAC TTGGATTATT TCAATTGGTA TTACGCAAAC AAAAAGAGCA
AACGATACGA TGGTTATTGT CAAGTTAGCT GTCATCCTAC TCTTTATCGT CTGCACAATT
TGGTTCATTA AGCCACATAA CTGGCAGCCT TTTTCTCCTT ATGGTTTGTA TTCTTTCCAT
AACGGTACGG CAGCCGGAAT TATTCCAGCG GCTTCAATTG TATTTTTCTC GTTTATCGGT
TTTGATTCCG TTTCTTCTAG TGCTGAAGAA ACAATCAATC CAAGCAAGAC TCTTCCTCGT
GGGATCTTGT TGTCCTTATT TATCTCAACG GTTCTATATA TCATTATGAC TTTGATTATG
ACCGGTGTTG TGAAGTTCAC TGTTTTTGCA AAATATTTAA ATGCACCGGT TTTGGCGGTT
CTGCATTCAA CCGGGCAGAC TTGGTTATCA ATCATTGTAA GTATCGGTGC TATTTTGGGT
ATAACGACCG TCATCCTGGT TCAGCTTTAT GGACAATCTA GAATTAGTTA TTCAATGTCG
CGCGATGGTT TGTTTCCAAA GTTTTTTGGA GATGTTAATA TGAAATACCA AACTCCCTTT
AAAGGTACTT GGTTCTTTGG TATCATTACA GCGATTGCCG GTGGTTTGAT AAACTTGAAT
ATTCTAGCCG AACTAGTTAA TATCGGAACA TTAACTGCCT TTATTCTCGT TTCAGCTGGT
GTCCTTTGGA TGCGTCATTC CCACCCGGAA GTTCATCGAG GTTTCAAGGC ACCAGGGGTT
CCATTTACTC CAATCATCGC AATTATTTTC TGTTTGGTTT TGATTGCAGG TTTGAATTGG
GAAACCTGGA TTAGATTTAT CGTTTGGTTC GCTATTGGTA TGATTCTTTA TTTTGGATAC
GCCAAAAAGC ATTCCAAGTT AAATTCTTTT AAACCACAAG ATAAGGGAGC TGATTGA
|
|---|
| Protein sequence | MDIFRKKDVG EILKHSTPLK RTLRTWDLTF LGIGAIIGTG IFVLTGKGAL TAGPAISVSF
LVAAICCGFA GLCYAEFASM APVAGSAYTY SYIAFGEIIA FIIGWDLILE YTLGAATVSV
GWSGYFANLL GNLGIHIPTV LTAAAGTTAG VTSYFNLPAF LIVLLITWII SIGITQTKRA
NDTMVIVKLA VILLFIVCTI WFIKPHNWQP FSPYGLYSFH NGTAAGIIPA ASIVFFSFIG
FDSVSSSAEE TINPSKTLPR GILLSLFIST VLYIIMTLIM TGVVKFTVFA KYLNAPVLAV
LHSTGQTWLS IIVSIGAILG ITTVILVQLY GQSRISYSMS RDGLFPKFFG DVNMKYQTPF
KGTWFFGIIT AIAGGLINLN ILAELVNIGT LTAFILVSAG VLWMRHSHPE VHRGFKAPGV
PFTPIIAIIF CLVLIAGLNW ETWIRFIVWF AIGMILYFGY AKKHSKLNSF KPQDKGAD
|
|---|
| |