Gene OEOE_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOEOE_1005 
Symbol 
ID4415677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOenococcus oeni PSU-1 
KingdomBacteria 
Replicon accessionNC_008528 
Strand
Start bp940310 
End bp940900 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content36% 
IMG OID639669206 
Productcondensin subunit ScpB 
Protein accessionYP_810579 
Protein GI116491035 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATC TTGATCAAAC GGCCCAATTA TTCTCTTTGG TTTTTGTTTC CGGAGATGAT 
GGTATTGATC TGCAAAGTAT TAGTAAAATA ACTGGTTTTG ATAGATCGGC TGTTCAAATT
GATCTGGAAA GCCTGTCCAA CCGTTTGGAA GAAGATCAAC AAAATCCGAT AAAACTGGTC
GAAAACGATC AGGTCTATCG TTTGGTTACG AAAAGTAAAT TTGCGCCGCT TCTAAAAAAA
TATTATCAAA CACCAGTTGC TAATAGTTTA TCTAAAGCAA GTTTGGAAAC TCTAACAATT
ATTGCTTATA AGCAACCGGT CACTAGAATC GAGGTTGATA AAATTCGCGG CGTTAATTCA
TCTGGCGCAA TTTCTCGACT CGTTTCCAGA GAACTTATTC AAGAATCCGG AAGAAAAGCG
GAGGTTGGTC GCCCGCTTCT CTACACTACA ACTAACTTTT TTCTCGATTA TTTTGGGCTT
AAAAAAATTG ATGATTTACC AGAACTACCA GATCCTGAAG ATCTAAATAA CATTGATGAC
GATCAAATAG AATTGTTTCA AAAACACAAA AACAGAGAAA GCAAAAAATA A
 
Protein sequence
MPDLDQTAQL FSLVFVSGDD GIDLQSISKI TGFDRSAVQI DLESLSNRLE EDQQNPIKLV 
ENDQVYRLVT KSKFAPLLKK YYQTPVANSL SKASLETLTI IAYKQPVTRI EVDKIRGVNS
SGAISRLVSR ELIQESGRKA EVGRPLLYTT TNFFLDYFGL KKIDDLPELP DPEDLNNIDD
DQIELFQKHK NRESKK