Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_1005 |
Symbol | |
ID | 4415677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 940310 |
End bp | 940900 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639669206 |
Product | condensin subunit ScpB |
Protein accession | YP_810579 |
Protein GI | 116491035 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGATC TTGATCAAAC GGCCCAATTA TTCTCTTTGG TTTTTGTTTC CGGAGATGAT GGTATTGATC TGCAAAGTAT TAGTAAAATA ACTGGTTTTG ATAGATCGGC TGTTCAAATT GATCTGGAAA GCCTGTCCAA CCGTTTGGAA GAAGATCAAC AAAATCCGAT AAAACTGGTC GAAAACGATC AGGTCTATCG TTTGGTTACG AAAAGTAAAT TTGCGCCGCT TCTAAAAAAA TATTATCAAA CACCAGTTGC TAATAGTTTA TCTAAAGCAA GTTTGGAAAC TCTAACAATT ATTGCTTATA AGCAACCGGT CACTAGAATC GAGGTTGATA AAATTCGCGG CGTTAATTCA TCTGGCGCAA TTTCTCGACT CGTTTCCAGA GAACTTATTC AAGAATCCGG AAGAAAAGCG GAGGTTGGTC GCCCGCTTCT CTACACTACA ACTAACTTTT TTCTCGATTA TTTTGGGCTT AAAAAAATTG ATGATTTACC AGAACTACCA GATCCTGAAG ATCTAAATAA CATTGATGAC GATCAAATAG AATTGTTTCA AAAACACAAA AACAGAGAAA GCAAAAAATA A
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Protein sequence | MPDLDQTAQL FSLVFVSGDD GIDLQSISKI TGFDRSAVQI DLESLSNRLE EDQQNPIKLV ENDQVYRLVT KSKFAPLLKK YYQTPVANSL SKASLETLTI IAYKQPVTRI EVDKIRGVNS SGAISRLVSR ELIQESGRKA EVGRPLLYTT TNFFLDYFGL KKIDDLPELP DPEDLNNIDD DQIELFQKHK NRESKK
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