| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0778 |
|---|
| Symbol | |
|---|
| ID | 4416832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 727201 |
|---|
| End bp | 728445 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639668989 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_810370 |
|---|
| Protein GI | 116490826 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.100939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA ATTTTTTGGA TCCTCAATTG GCAAAAGCTG TTTCGGGCGA GGAAGAACGG
CAGCGGCATA ACATTGAATT GGTTGCTTCC GAGAATTTTG TCTCAAAAGC TGTCCGCCAA
GCACAGGGCA GTGTTTTGAC GAATAAATAT TCTGAAGGTT ATCCGGGGAA ACGCTATTAT
GGCGGTAATG AATATATCGA TATTGCCGAA AATTTAGCGA TTGAACGAGC AAAGGAACTG
TTTGGTGTTA GTTATGCTAA TGTTCAGCCG CATTCCGGTT CCAGCGCGAA TTTTGAAGCA
TATATGGCTT TTCTGCATCC TGGCGATAAA ATCCTTGGAA TGAACTTGGA TTCCGGGGGC
CATTTAACTC ATGGAGCCAG TGTTAGTTTT TCAGGCAAAA TGTACGAAGC TCAGTCTTAT
AAAGTTGATT CAGAGACTGA ATTACTTGAT TATGATGCGA TTTTAAAACA GGCAAAAGAA
TTTAAGCCTA ATTTAATTAT TGCCGGCGCT TCGGCTTATT CCCGAACGAT CGATTTTCAG
GCTTTTCGTG ATATAGCTGA TGAAGTCAAT GCTTATTTGA TGGTTGATAT TGCTCATATT
GCTGGTTTAA TTGCGGCTGG ATTGCATCCA AGCCCGGTTG GATTGGCTGA TATCATTACA
ACAACTACCC ATAAAACTCT TCGAGGACCT TGCGGCGGTA TGATTTTGGC TGACGAAAAA
TATGCTAAGA GGATTAATTC GGCCGTTTTC CCGGGATCAC AAGGTGGCCC TTTGGATCAC
GTGGTTGCGG CCAAGGCAGC GGCCTTTTAT GAAGATTTGC AGCCTGATTT CAAGACTTAT
TCTGCTCAGA TCATCAAGAA CGCGAAAACA ATGGCCGATG CTTTTTCCAA AGAGCCGGAT
GTGCGTGTTG TTTCCGGTGG TACTGACAAT CATATGTTCA CTCTCGATTT AACCAAGACT
GGTTTAAATG GCCGACAAGT TCAAGATTTG TTGGATTCTG TTTCTATTAC TCTTAATCGC
GAGGCCCTTC CGAACGAGAA ACGTTCGCCC TTTGTCACTT CCGGTGTTCG AATTGGTACT
CCAGCCATGA CTACCAAGGG CTTAAAAGAA AACGAAATGC TGCAAATCGA ACACTTGATT
ATGCGGGCTA TTCACGCTCA TGATGACAAA AATGAATTAA CAAAGATTAA GCGGGATGTT
TTTGATTTGA TGGATAAATT TCCTTTTGAT TCCAATCCCT TCTGA
|
|---|
| Protein sequence | MTKNFLDPQL AKAVSGEEER QRHNIELVAS ENFVSKAVRQ AQGSVLTNKY SEGYPGKRYY
GGNEYIDIAE NLAIERAKEL FGVSYANVQP HSGSSANFEA YMAFLHPGDK ILGMNLDSGG
HLTHGASVSF SGKMYEAQSY KVDSETELLD YDAILKQAKE FKPNLIIAGA SAYSRTIDFQ
AFRDIADEVN AYLMVDIAHI AGLIAAGLHP SPVGLADIIT TTTHKTLRGP CGGMILADEK
YAKRINSAVF PGSQGGPLDH VVAAKAAAFY EDLQPDFKTY SAQIIKNAKT MADAFSKEPD
VRVVSGGTDN HMFTLDLTKT GLNGRQVQDL LDSVSITLNR EALPNEKRSP FVTSGVRIGT
PAMTTKGLKE NEMLQIEHLI MRAIHAHDDK NELTKIKRDV FDLMDKFPFD SNPF
|
|---|
| |