Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OEOE_0680 |
Symbol | |
ID | 4416753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Oenococcus oeni PSU-1 |
Kingdom | Bacteria |
Replicon accession | NC_008528 |
Strand | + |
Start bp | 642563 |
End bp | 643408 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639668899 |
Product | glutamate racemase |
Protein accession | YP_810282 |
Protein GI | 116490738 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAATC GAGGAATTGG ATACATAGAT TCTGGCTTGG GCGGTTTAAC CGTTGTCCGC GAAGCTTTAA AACAATTACC GAATGAGTCG GTTTATTTTG TTGGTGATGA AGCGCGAATG CCTTATGGAC CGCGACCAAC TGTTGAAATT CAAAAATTTA CCTTGCAAAT GGCCGATTTT CTCGTTAAAA AACACAATAT TAAAGCGTTG GTCGTTGCTT GTAATACAGC TACCGCACAG GCTCTGCCCC AGTTAAGGGC GTATTTGGAG ATACCGGTAA TTGGTGTTAT TTCTGCCGGG GCGCTCGCCG GTATCAATGC GACAAGAAAT TTACATGTCA ATGTCATCGG AACCCAATCG ACTGTTGAGT CGAAGGCTTA TTATGACCAA TTAATAGCCC TGAATTCCGA TTTGGTTATT GAACAAAAAG CTCTTCCTGA ATTCGTTCAA CTTGTTGAAA GCGATATGGC GGGAACTCCT AAGGGAAAAC AAATCGTTTA TCAAGCGATT CATAATTGGA TGGAAGAAAA AAACGATGGT AAAAAATCCG ATACCTTAGT TCTAGGATGT ACTCATTTTC CTATTTTGAA GAAGGAAATT CAGGCAGCGG TCGATAAAAA CGTAGCAGTT GTTGATCCGG CTTCAGAGGA AATCCTTCAA ACAGCGGAGA TAATGAGAAA AAATAACGCT TTTCACGATT CAAAGAATAT TAATCATCAT GAAAAAGACG TTTTTTATAC GACTGGAAAT ATTGGCCGTT TTTCCAAATT CACTCGTGAA TGGCTCAATA AAAGCAATTT AACGATTAAA GAACTTCATA TTGATCAAAA AGGTTTAAAA GAATGA
|
Protein sequence | MDNRGIGYID SGLGGLTVVR EALKQLPNES VYFVGDEARM PYGPRPTVEI QKFTLQMADF LVKKHNIKAL VVACNTATAQ ALPQLRAYLE IPVIGVISAG ALAGINATRN LHVNVIGTQS TVESKAYYDQ LIALNSDLVI EQKALPEFVQ LVESDMAGTP KGKQIVYQAI HNWMEEKNDG KKSDTLVLGC THFPILKKEI QAAVDKNVAV VDPASEEILQ TAEIMRKNNA FHDSKNINHH EKDVFYTTGN IGRFSKFTRE WLNKSNLTIK ELHIDQKGLK E
|
| |