Gene OEOE_0476 details

Gene Information

• Locus tag: OEOE_0476
• ID: 4416716
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: +
• Start bp: 462901
• End bp: 464895
• Gene Length: 1995 bp
• Protein Length: 664 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639668707
• Product: peptide ABC transporter ATPase
• Protein accession: YP_810096
• Protein GI: 116490552
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTATT TGGAATTAAA AGACATTCAT AAGTCTTATA CATTGAATAA AACCGAGAAA 
TTTCCAGTCT TAAAGGGAAT CAATTTAAAA TTCGACAAAG GTGAATTTGT TAGTATTCTG 
GGAGAATCCG GTGGCGGCAA GTCGACCTTA ATGAATATTA TCGGTGGCCT GGACCATGAT 
TACCAAGGCG ATGTTATTTT AAACGGTACT TCGACTCGTG ATTTCACGGA AAAACAAATG 
GATGCCTATC GTCGACAAAC AATTGGTTTT ATTTTCCAAA GTTTTAATTT AATTTCCCAT 
CTTACTGTTT TGGATAACGT TCTTATTAGT TTGGATATGA CCACTTTGAC GCGTGCCGAG 
AAAGAAAAAC GTGCCAAGGA TTTGCTTAAA CAAGTTGGTT TGGAAGAGCA TATCAAGAAG 
CACCCGAATC AGTTGTCTGG TGGCCAAAAA CAACGTGTTG CGATTGCAAG AGCCCTTTCG 
TCGGATCCCG ACATTATTAT TGCTGATGAA CCGACTGGTG CCCTGGACTC GAAAAATACC 
GATGAGATTC TTGAAATAAT GGGAGGAATT GCCAAGACCG GAAAATTGGT CATTGCAGTT 
ACTCATTCTG AAGAAGTCTC TCATTTTGGG ACGAGAATTG TTCATATGTC CGATGGAATA 
ATTGACAAAG ATCAGACAAA TCGCGAGAAA TATCCGGTTC CAAGCAAACA GTCTCATCGG 
CTTGTTTCCA AAAAATTAGG AATGCTGGCC GCTTACAAAA ATGCTTATAA ACATACAATG 
TATTATTTTT GGCGTAACTT CTTAATCATG CTTGGGACTG GAATTGGTAT TTTTGCTGTT 
TTGCTGTTCT CTGGTTTAGG AAATGGAATT ACCGCTTTTA TTAACAGCCA AATCAATTCG 
CTTGTGAACC CTCGTTCGGT AACAGTTATG AAGAATACTT CCGGAAAGAA AATGAGCCAG 
GCTCAATTTG AAAAAACAGT ACAGCAGGCT AGTTCAAATC CTTCATCTAT GTTGATCAAA 
CAAAGCGAAC TGGACAAACT TAAATCTCTG AAAAATGTTA ATACTGTTGA ACCGGGTTAC 
CAATTCAGCC AATATACCTT AACGATGACT GGGGTTAAAA GTCCCGTAAC AGGGACCGGG 
CTGCAAACGT GGACAAAGGC CTATTCCAGT AATACGGTCA AAGTTGGTAA AAAGCCCGGT 
GAAAATCAGA TTGTGATTGA CAAGTCGCAG GCGCAGACTT TTTTGGGAAC AAAAAAATAT 
AAGCAGGCAA TCGGTAAAAC CGTTAGTTTG ACTTTCACTT GGATTAATAA AGACCAGCAA 
CCTGTCACTG TTAAAAAGGA TTTGAAAGTT GTCGGGATTG CTAATGGAGG CCAATCGGGT 
GCGATAGCCG GTACGAATTA TTCAACGATG AAAAATATGT TGACTGATGC CGGTGCCACA 
ACCGATCCGA ATTTTGTTTC TGTTAATGCC AATTCGATCG ATGCTACAAA AACAGTTGCT 
AAAAAAATTA ACAATATTAA AACAGATGGT AAATATACTT TTGGTGCAAT TACGGTTGGT 
GATGTTCTTA ATACCGTTAG TTCATATGTA AAATTAGCAA CAAACGTATT ATCTGCAATT 
GCTGCGATTT CCTTAGTTGT TTCCGCCCTA ATGATTATCG TTTCAATGTA TATGAGCGTT 
TCTGAAAGAA CCAAAGAAAT TGGTGTGTTG CGTGCTCTGG GTGAAGGCAA GAAAGACATC 
AGTCGTCTAT TTACCGGAGA ATCTGTTTTG ATCGGTTTGT TCTCGGCAGT TTTGGCGCTG 
GCCCTTGCTT TTGGAATTGG CGGAATTGTC AATAAACTGC TCTACGGTTT GGCAAAGGCG 
AATATGGTTG TAATTACGCC AGGAAATGTT GTCTTTGCTT TTGTAATTGC GATTGTTATT 
TCATTCTTGG CCGCTTTGTT ACCTGCTAGA AGAGCCGCAA AGCTTGATCC AATTGAATCT 
CTTGCGACAG AATAG 

 

Protein sequence

MAYLELKDIH KSYTLNKTEK FPVLKGINLK FDKGEFVSIL GESGGGKSTL MNIIGGLDHD 
YQGDVILNGT STRDFTEKQM DAYRRQTIGF IFQSFNLISH LTVLDNVLIS LDMTTLTRAE 
KEKRAKDLLK QVGLEEHIKK HPNQLSGGQK QRVAIARALS SDPDIIIADE PTGALDSKNT 
DEILEIMGGI AKTGKLVIAV THSEEVSHFG TRIVHMSDGI IDKDQTNREK YPVPSKQSHR 
LVSKKLGMLA AYKNAYKHTM YYFWRNFLIM LGTGIGIFAV LLFSGLGNGI TAFINSQINS 
LVNPRSVTVM KNTSGKKMSQ AQFEKTVQQA SSNPSSMLIK QSELDKLKSL KNVNTVEPGY 
QFSQYTLTMT GVKSPVTGTG LQTWTKAYSS NTVKVGKKPG ENQIVIDKSQ AQTFLGTKKY 
KQAIGKTVSL TFTWINKDQQ PVTVKKDLKV VGIANGGQSG AIAGTNYSTM KNMLTDAGAT 
TDPNFVSVNA NSIDATKTVA KKINNIKTDG KYTFGAITVG DVLNTVSSYV KLATNVLSAI 
AAISLVVSAL MIIVSMYMSV SERTKEIGVL RALGEGKKDI SRLFTGESVL IGLFSAVLAL 
ALAFGIGGIV NKLLYGLAKA NMVVITPGNV VFAFVIAIVI SFLAALLPAR RAAKLDPIES 
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