Gene OEOE_0453 details

Gene Information

• Locus tag: OEOE_0453
• Symbol: rnc
• ID: 4416509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Oenococcus oeni PSU-1
• Kingdom: Bacteria
• Replicon accession: NC_008528
• Strand: +
• Start bp: 438201
• End bp: 438896
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 639668686
• Product: ribonuclease III
• Protein accession: YP_810075
• Protein GI: 116490531
• COG category: [K] Transcription
• COG ID: [COG0571] dsRNA-specific ribonuclease
• TIGRFAM ID: [TIGR02191] ribonuclease III, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAATA TTCAAAAAGG TATAAAAGAA GATTTTGGAA TTGAATTTGC TAATCAGGAT 
TTATTGCTTG AGGCTTTTAC TCAGGGCAAT TATTTAAATG AACATCCTGA AGAAAAGGGT 
CGCGACTATC AGCGACTGGA GTTTTTAGGC GATTCTGTTA TGCAATTGAT TGTGGCCGAC 
TATTTATTTA CTCGCTATCC TGCTTGGGAA GAAGGCCAGT TGACAGAAAT GCGAATTGCG 
ATGGTACAAA GCAAGTCTTT CTCTCATTTT GCCAGATTGG CCGGTTTTAA CCGTTATATT 
CGTTTGGGAA AAGGTGAGGA ACTTTCCGGA GCTCGTAATC GCGATAGTCT CTTGGAAGAT 
ATTTGGGAAG CATTTATCGG TGCTTTATAT AAGGATCAAG GCGCTAAAGC GGTTTTTACT 
TTTTTAAATA AGGCCTTTTT TCCAGCGATC GATGAAGGTT TTTTTGAAGA ATTTATTGAT 
TACAAATCCA AATTACAGGA ATTGCTTCAA AAGGCCGGCT CGGTTGATAT TGAATATAAA 
GTTGAAAATG AAGATCTTTC CGACCCCCAA AAACCGCATT TTGAAGTAAC TGTCTTCGTA 
AACGATAAAG CAATTGGTTC CGGTTCCGGA CGCTCAATAA AAATCGCCGA AAAGCGGGCT 
GCTAAAAAAG CCTATCAGGA TGTGACGCCC AGATGA 

 

Protein sequence

MNNIQKGIKE DFGIEFANQD LLLEAFTQGN YLNEHPEEKG RDYQRLEFLG DSVMQLIVAD 
YLFTRYPAWE EGQLTEMRIA MVQSKSFSHF ARLAGFNRYI RLGKGEELSG ARNRDSLLED 
IWEAFIGALY KDQGAKAVFT FLNKAFFPAI DEGFFEEFID YKSKLQELLQ KAGSVDIEYK 
VENEDLSDPQ KPHFEVTVFV NDKAIGSGSG RSIKIAEKRA AKKAYQDVTP R