| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0433 |
|---|
| Symbol | infB |
|---|
| ID | 4416573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | + |
|---|
| Start bp | 419005 |
|---|
| End bp | 421494 |
|---|
| Gene Length | 2490 bp |
|---|
| Protein Length | 829 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639668666 |
|---|
| Product | translation initiation factor IF-2 |
|---|
| Protein accession | YP_810057 |
|---|
| Protein GI | 116490513 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG AAGAAAAGAA ACGGCGTCCG TTGGTACATC ACATTAGAAA GCAATCGGCT
TCTAAATCGG AATTGCCAGC CTCTCAAAGA AGGCATGCAG CTGGTCTTTC GAGCCGTGCT
CAAGGAGAAA GGCATGGTGA AAAGACGCCA ACTAATAACC AGGATTCTCG TCAACGCAGG
CGAGTAAGTT TTGATTCCAA TACAGGTCGT CCTGCACCCA AAGACCACAA ACCGATTCAT
GCAGGAAGCG CAAGCGCGCC TGCTGGGTCC TCTTTGAATC AACCCCGGAA AACAACAAGC
CAACGTCAAC GGACGAATTC GAGAACCAGT AAAACAACTG TTGAACCGCT TCGCCGTGCT
CACCCACATA ATCCGTTACC AAATCAGCAT CCGGTAACCA ATCAAAGGAA TAACCGTCGA
AACAATAATC GTACGGCTGG CGGGCAGTCC TCGAATAATA GGAACAATAA CAATCACAAA
ACAAATGCAT CGCAAAATGG TACAGGACGT TTTGGTGGCG CATTAGCATC CGGGAATAAT
TCTGCTCGTA ATAATACTCG TCGTCGCAAT CAAACAACGA CAGCTCCAGG TACTCATTTT
GTTAGTGGCC CGGCTCGTGG TATCCGTCGC AAGTCGGGAC CCAAAGGGTC CAAGAAAGCT
CAGCGTATTG CAGCAGCAGC AGTTTCCAAG AATCGTCAAA ACGAACGTAA GGAACAGCCG
TTACCAAAGG TTCTGGAATA TCGTTTGGGC ATGAATGTTC AGGATATTGC CAAAATTATT
CACCGTGATG TTACTGAAAT TCTTAAGAAA CTCTTCTTAC TTGGCGTAGT TGTAAACCAA
AATCAGAGTT TGGATGCCGA CACGATTGAG TTACTAGCTG CTGATTATAA TATTGAAGCA
AAGCAAAAAG AAGAAGTCGA TGTTTCTGAT ATTGATCGTT TCTTTGATAA GACCGACAAT
GATATCGATC AGAGCAAATT AGTATCGCGT GCCCCGATTG TTACCATTAT GGGTCACGTT
GATCATGGTA AGACAACTCT TTTGGATTAT TTGCGTCACA CTCATGTAAC GGAAGGCGAA
GCAGGTGGAA TCACTCAACG TATTGGGGCT TATCAGGCTC GTTTGCATGA TCGTCTGATT
ACTTTCCTTG ATACACCTGG CCATGAAGCC TTTACAGAAA TGCGTGCTCG TGGTGCGAAC
GTTACCGACA TTACTATATT GGTTGTTGCA GCTGATGATG GAATTATGCC GCAAACAATC
GAAGCTATTC ATCATGCTCA GGCAGCGAAA ACACCGATTA TTGTCGCAAT TAACAAGATT
GATATTCCAG GTGTCGATCC GAATAACGTT ATCAACGAAC TCATGAAATA TGATCTTGTT
CCAGAAGAGT ATGGCGGCAG TACGATTGAA GTACCGATTT CTGCTAAAAC AGGTCAAAAT
GTTGATAAAC TTTTGGAGAT GATTTTACTT CAAGCTGATA TGATGGACCT AAAATCAGAC
CCAACGGCCA AGTCTCGCGG ATCTGTTATC GAAGCCCGTT TGGACAAGGG CCGTGGAGCT
GTTGCGACAT TGCTGATTCA GCAAGGAACA CTGAAGACTG GCGATCCGAT TGTCGTTGGA
AATACTTTTG GTCGTGTTCG GACAATGAAT GATGCATCTC ACAAAAAACT TGATTCCGCT
TTGCCAGCGA CTCCGGTTGA AATTACCGGT TTGAATGAAG TTCCGCAGGC CGGTGATCAT
TTCGTTGTCA TGGATTCTGA AAAAGATGCT CGCGAGGCTG GAGAGTCTAG AGCTAAGAAG
GCAATGGAAG AAGAACGTAA TAATGGGGCT GTTGTGACAT TGGACACACT TTTCTCAACA
ATGGCCAAGC GGGATATGAA GACAGTTTCC TTAATCGTTA AAGCTGATGT TCAAGGATCG
GTTGAAGCTC TCTCTGCATC TCTAAAGAAA ATCAAGGTTG AAGGCGTTCG AGTTGACATA
CTCCATGCAG CCGTTGGTGC GATTAATGAG TCTGATATTA ACCTTGCCGA AGCTTCTGGC
GCGATTATTA TCGGCTTTAA TGTTCGTCCG GTTGGCCAAG CTAAGACTGA TGCCGAGCAA
AAACATGTCG ATGTCCGACT TTATAACGTT ATTTACGATG CCATTAATGA AGTCGAAGCA
GCCATGAAGG GCCAACTGGA ACCTGTTTAT AAGGAGAAGA CTCTGGGAAC TGTTTCAGTA
CGTGAATTAT TCCATTTCTC CAAAATTGGA ACAATTGCCG GTGGCTTGGT TACCGATGGT
ATTATTACCA GTGATTCGAA AGTTCGTCTT GTTCGCGACG GCGTTGTTGT TTATGATGGA
CAACTGGGTT CTTTGAAACA CGGAAAAGAT GATGTCAAAG AGGTCAAGAA GGGCTTTGAA
CTTGGTTTGA CAATCGCTAA TTATAACGAT GAAAAAGTCG GCGATGTCAT TGAAGCTTAT
ACGATGGAAG AGGTTAAGGC AAATGCCTAA
|
|---|
| Protein sequence | MTEEEKKRRP LVHHIRKQSA SKSELPASQR RHAAGLSSRA QGERHGEKTP TNNQDSRQRR
RVSFDSNTGR PAPKDHKPIH AGSASAPAGS SLNQPRKTTS QRQRTNSRTS KTTVEPLRRA
HPHNPLPNQH PVTNQRNNRR NNNRTAGGQS SNNRNNNNHK TNASQNGTGR FGGALASGNN
SARNNTRRRN QTTTAPGTHF VSGPARGIRR KSGPKGSKKA QRIAAAAVSK NRQNERKEQP
LPKVLEYRLG MNVQDIAKII HRDVTEILKK LFLLGVVVNQ NQSLDADTIE LLAADYNIEA
KQKEEVDVSD IDRFFDKTDN DIDQSKLVSR APIVTIMGHV DHGKTTLLDY LRHTHVTEGE
AGGITQRIGA YQARLHDRLI TFLDTPGHEA FTEMRARGAN VTDITILVVA ADDGIMPQTI
EAIHHAQAAK TPIIVAINKI DIPGVDPNNV INELMKYDLV PEEYGGSTIE VPISAKTGQN
VDKLLEMILL QADMMDLKSD PTAKSRGSVI EARLDKGRGA VATLLIQQGT LKTGDPIVVG
NTFGRVRTMN DASHKKLDSA LPATPVEITG LNEVPQAGDH FVVMDSEKDA REAGESRAKK
AMEEERNNGA VVTLDTLFST MAKRDMKTVS LIVKADVQGS VEALSASLKK IKVEGVRVDI
LHAAVGAINE SDINLAEASG AIIIGFNVRP VGQAKTDAEQ KHVDVRLYNV IYDAINEVEA
AMKGQLEPVY KEKTLGTVSV RELFHFSKIG TIAGGLVTDG IITSDSKVRL VRDGVVVYDG
QLGSLKHGKD DVKEVKKGFE LGLTIANYND EKVGDVIEAY TMEEVKANA
|
|---|
| |