| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OEOE_0417 |
|---|
| Symbol | |
|---|
| ID | 4416378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Oenococcus oeni PSU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008528 |
|---|
| Strand | - |
|---|
| Start bp | 402339 |
|---|
| End bp | 403298 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639668650 |
|---|
| Product | citrate lyase regulator |
|---|
| Protein accession | YP_810041 |
|---|
| Protein GI | 116490497 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA ATGACGACAT AACCTACCTC GAAAAGATTG CAAATATTTC TCATGACTAT
TATTTGACAA AATTAAGTAT CGGCGAGATA TCGGAAAAAT ATAAATTGAG TCGCTACCTA
ATCAGTCGAT ATCTTGACGA CGCTTTAGAG CAGGGCTTGG TTAAAATAAC CATCAATGCT
CCGCAAGAGA GAAATTTCGA ATTAGAGAAA AAATTTCGAC AGTTGTTTAC CATAAAAAAT
ATTTTCATAA TTAAAGACAG CGAGAACCCT TCTTTAAAAA ATGAAAATGT AATTGCTTTT
GCCGCAAAAC ATATTCAATC TTTAATTGAA AACAGTCAAG TAGTCGGTAT GGCGTGGGGT
GATACGGTTT ATCGAGTAAT CGACGCCTTT TCAGCCAAAG TCAAAGAGGA CTTGGTTTTT
ACTCAGTTTA TTGGTGAAAA TATGAAGTAT AAATCGGCTG CCGGATCGGG AAGGATGGTT
GAAAAGGCTG CTGCGAAATA TAGCGCGCAA TTCGTGACAA TCGCTGGTCC GCTTTATATT
GTTAACAATC AAGCACGTGA ACTGCTGAAA AAAGAACCGT CTTTTAATCG GGCAGGAAAT
CTAATTAAAA AACTGGATTT GATTTTTTGT GGAATCGGAA CACTCAGTTC GATTGAATCA
ATTCCCGCTT GGAACGAAAA TAAATCGATC ATTTTTCCAG GTGTCAATTT CAAAAATGTG
GCTGGCATGC TCTATGGGAG ACCCTATAAT ATCGATGGGC AATTCTTAAA TTTGTCCGAT
GACAAGGTCT TCGGCTCGAA TATAAAATCA ATTCTTTCAG TTCCCCGCCG AATAGCGTTT
ACAAACAGCA AGTTTAAAGC GCGAGCCATG CTGGGCGCTT TAAGAGGTCG TTTGCTAACC
GATATCATTA TTGATGAATC GATCGCTCAA AGAATTTTAA TGGAAGCAGG GCGGGACTGA
|
|---|
| Protein sequence | MKTNDDITYL EKIANISHDY YLTKLSIGEI SEKYKLSRYL ISRYLDDALE QGLVKITINA
PQERNFELEK KFRQLFTIKN IFIIKDSENP SLKNENVIAF AAKHIQSLIE NSQVVGMAWG
DTVYRVIDAF SAKVKEDLVF TQFIGENMKY KSAAGSGRMV EKAAAKYSAQ FVTIAGPLYI
VNNQARELLK KEPSFNRAGN LIKKLDLIFC GIGTLSSIES IPAWNENKSI IFPGVNFKNV
AGMLYGRPYN IDGQFLNLSD DKVFGSNIKS ILSVPRRIAF TNSKFKARAM LGALRGRLLT
DIIIDESIAQ RILMEAGRD
|
|---|
| |