Gene LACR_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2534 
Symbol 
ID4432166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2364978 
End bp2366318 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content40% 
IMG OID639668199 
Productsurface antigen 
Protein accessionYP_812075 
Protein GI116513168 
COG category[S] Function unknown 
COG ID[COG3883] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA AGATTATCTC AGCTATTTTA ATGTCTACAG TGGTACTTTC TGCTGCAGCG 
CCGTTGTCAG GGGTTTACGC TGACACAAAT TCAGATATTG CTAAACAAGA TGCGACAATT
TCAAGCGCGC AATCTGCTAA AGCACAAGCA CAAGCACAAG TTGATAGCTT GCAATCAAAA
GTTGACAGCT TACAACAAAA GCAAACAAGT ACTAAAGCAC AAATCGCTAA AATCGAAAGC
GAAGCTAAAG CACTTAATGC TCAAATTGCT ACTTTGAACG AAAGTATCAA AGAACGCACA
AAGACATTGG AAGCTCAAGC ACGTAGTGCT CAAGTTAACA GCTCAGCAAC AAATTATATG
GATGCTGTTG TTAATTCAAA ATCTTTGACA GATGTTATTC AAAAAGTAAC AGCTATTGCT
ACTGTTTCTA GTGCCAACAA ACAAATGTTG GAACAACAAG AAAAAGAGCA AAAAGAGCTT
AGCCAAAAGT CAGAAACTGT TAAAAAGAAC TACAACCAGT TCGTTTCTCT TTCACAAAGT
TTGGATTCTC AAGCTCAAGA ATTGACTTCA CAACAAGCTG AACTCAAAGT TGCGACTTTG
AACTATCAAG CAACAATTGC AACTGCACAA GATAAAAAAC AAGCTTTATT AGATGAAAAA
GCGGCTGCAG AAAAAGCAGC TCAAGAAGCA GCTAAAAAAC AAGCGGCTTA TGAAGCTCAA
CAAAAAGAAG CAGCACAAGC ACAAGCAGCT TCAACAGCAG CAACTGCTAA AGCTGTAGAA
GCAGCAACTT CATCAGCTTC TGCTTCATCT AGCCAAGCAC AAGCTTCACA ATCGAGTTCA
AGTACAAGTA GCAATAATAC ATCATCAAGT TCAAGCAGTT CTACTTCATC AAGTAGCTCT
AGCTCTAACA ATGATACAAC ACCAACACCA ACACCAACAC CAACACCAAC ACCTCCATCT
ACTGGTGGTA GCGGTATAAA TAGTTCACCA ATTGGAAATC CTTATGCTGG TGGTGGATGT
ACTGACTATG TATGGCAATA CTTTGCTGCA CAAGGAATTT ATATCAGAAA TATCATGCCT
GGTAATGGTG GACAATGGGC TTCTAATGGA CCTGCCCAAG GCGTACTCCA TGTTGTAGGA
GCTGCTCCTG GTGTTATCGC ATCAAGCTTC TCAGCTGATT TTGTTGGATA TGCAAACTCA
CCTTACGGTC ACGTAGCTAT TGTAAAATCA GTTAATTCAG ATGGTACAAT TACTATCAAA
GAAGGCGGAT ATGGTACAAC TTGGTGGGGA CATGAACGTA CTGTAAGTGC GTCTGGTGTT
ACTTTCTTGA TGCCAAACTA G
 
Protein sequence
MKKKIISAIL MSTVVLSAAA PLSGVYADTN SDIAKQDATI SSAQSAKAQA QAQVDSLQSK 
VDSLQQKQTS TKAQIAKIES EAKALNAQIA TLNESIKERT KTLEAQARSA QVNSSATNYM
DAVVNSKSLT DVIQKVTAIA TVSSANKQML EQQEKEQKEL SQKSETVKKN YNQFVSLSQS
LDSQAQELTS QQAELKVATL NYQATIATAQ DKKQALLDEK AAAEKAAQEA AKKQAAYEAQ
QKEAAQAQAA STAATAKAVE AATSSASASS SQAQASQSSS STSSNNTSSS SSSSTSSSSS
SSNNDTTPTP TPTPTPTPPS TGGSGINSSP IGNPYAGGGC TDYVWQYFAA QGIYIRNIMP
GNGGQWASNG PAQGVLHVVG AAPGVIASSF SADFVGYANS PYGHVAIVKS VNSDGTITIK
EGGYGTTWWG HERTVSASGV TFLMPN