Gene LACR_2463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_2463 
Symbol 
ID4432898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand
Start bp2296262 
End bp2297293 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content38% 
IMG OID639668133 
Productprotease 
Protein accessionYP_812014 
Protein GI116513107 
COG category[T] Signal transduction mechanisms 
COG ID[COG3480] Predicted secreted protein containing a PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA AAAATAAAAA AATCAGTCCC AAATTAAAAT GGGGCATCTC TATTGGTCTG 
ATTATTGTCG CTCTCCTTGT TTTAGTGTAT CCAACAAATT ACTATGTGGA AATGCCTGGA
ACAACCGAGC CATTAGGAAA AATGGTCAAA GTCGAAGGAA AAAAAGATGA GCACAAAGGT
GACTTTTTCC TTACTACCGT TCAAATTGCG CGCGCTAATC TTGCCACAAT GATTTACAGT
CATTTTAATA GTTTTACAAG CATTTACAGT GAACAAGAAA TGACCGGTGG CCTTAATGAT
GCGCAGTTCA ATCGTGTCAA CCAGTTTTAC ATGGAAACGG CACAAAATAC AGCCGTTTAT
CAGGCCTTCA AGTTGGCAAA TAAACCCTAT GAACTGAAAT ATGAAGGGGT TTATGTCCTT
GATATCGCTA AAAATTCGAC TTTTAAAAAT AAATTGGAAC TTTCGGACAC GATTACAGCA
GTCAATGGGG AAGAATTTAA ATCAAGTGCA GATATGATTG CTTACGTTTC GAAGCAAAAA
GTCGGCGATT CAGTTACCAT TGAATATACA CGGATTGATG GAAGTAAACA CAAGTCTACT
GGAAAATATA TCAAAATCGC TAATGGAAAA ACTGGAATCG GAATTGGACT AGTTGACCAT
ACTGAAGTAG TCACAGACCC AAAAGTTACA GTCAATGCAG GTTCAATCGG TGGACCATCT
GCCGGAATAA TGTTTACACT AGAGATTTAC AGTCAGTTGA CAGGTAAAGA TTTACGTGGT
GGTCGCGAAA TAGCAGGAAC TGGAACGATT GAACATGATG GAAGCATTGG CCAAATCGGT
GGGGTTGATA AAAAAGTAGC TACTGCTAGC AAAGAAGGCG CAAAAGTTTT CTTAGTTCCT
GACTCAGGCA CCAAAAAAGA AAGCAGCAAT AACTATCTTG GAGCCAAAGC AGCCGCTAAA
AAATTAAAAA CGAAGATGAA AATTGTTCCC GTCAAGACTA TTCAGGACGC TTTAGATTAT
TTAGAAAAAT AA
 
Protein sequence
MKKKNKKISP KLKWGISIGL IIVALLVLVY PTNYYVEMPG TTEPLGKMVK VEGKKDEHKG 
DFFLTTVQIA RANLATMIYS HFNSFTSIYS EQEMTGGLND AQFNRVNQFY METAQNTAVY
QAFKLANKPY ELKYEGVYVL DIAKNSTFKN KLELSDTITA VNGEEFKSSA DMIAYVSKQK
VGDSVTIEYT RIDGSKHKST GKYIKIANGK TGIGIGLVDH TEVVTDPKVT VNAGSIGGPS
AGIMFTLEIY SQLTGKDLRG GREIAGTGTI EHDGSIGQIG GVDKKVATAS KEGAKVFLVP
DSGTKKESSN NYLGAKAAAK KLKTKMKIVP VKTIQDALDY LEK