Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_2456 |
Symbol | |
ID | 4432588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 2288009 |
End bp | 2289034 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639668127 |
Product | hypothetical protein |
Protein accession | YP_812008 |
Protein GI | 116513101 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000113329 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAA AAATCCTTTT AGGCGGTTAT ACTAAACGTG TATCTAAAGG CGTTTACAGT GTTCTATTAG ATAGCAAGAA AGCTGAATTG TCGGCTTTAA CTGAAGTTGC AGCGGTTCAA AATCCAACTT ATATCACTCT TGATCAAAAA GGGCACCTCT ACACTTGTGC TGCTGATGGA AATGGTGGTG GAATTGCTAC CTTTGATTTT GATGGTCAAA ATACAACTCA CCTAGGGAAT GTAACGAGTA CTGGAGCCCC TTTGTGTTAT GTGGCTGTTG ATGAAGCACG TCAACTCGTT TATGGTGCCA ACTATCACTT GGGTGAAGTT CGTGTGTACA AAATTCAAGC TGATGGTTCC CTTAGATTAA CCGATACAGT TAAACATAAT GGTTCTGGCC CTCGACCTGA GCAAGCAAGT TCTCATGTCC ATTACTCTGA TTTAACTCCA GATGGTCGTC TTGTTACTTG TGATTTAGGT ACAGATGAAG TGACTGTTTA CGATGTTATT GGTGAAGGTA AACTCAATAT CGTTACGATT TATCGTGCCG AAAAAGGAAT GGGAGCTCGT CACATCAGCT TCCATCCTAA TGGAAAAATT GCTTATCTCG TCGGAGAATT AAATTCAACT ATTGAAGTTC TAAGCTATAA TGAAGAAAAA GGACGATTCG CTCGTCTTCA AACAATCAGT ACTTTACCTG AAGACTATCA CGGAGCCAAT GGAGTAGCTG CTATTCGAAT TTCTTCTGAT GGTAAGTTCC TCTATGCTTC TAATCGTGGG CACGACTCTT TAGCAATTTA CAAGGTAAGT CCTCTCGGAA CAAAATTAGA AGCTATTGGT TGGACAAAGA CTGAAGGTCA TATTCCACGT GATTTTAATT TTAATAAAAC CGAAGATTAT ATCATTGTCG CTCATCAAGA ATCTGATAAT TTAACTCTTT TCTTGAGAGA TAAAAATACA GGGTCATTAA CGTTAGAACA AAAAGACTTT TACGCTCCTG AAATTACTTG TGTTTTACCT TTGTAA
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Protein sequence | MKEKILLGGY TKRVSKGVYS VLLDSKKAEL SALTEVAAVQ NPTYITLDQK GHLYTCAADG NGGGIATFDF DGQNTTHLGN VTSTGAPLCY VAVDEARQLV YGANYHLGEV RVYKIQADGS LRLTDTVKHN GSGPRPEQAS SHVHYSDLTP DGRLVTCDLG TDEVTVYDVI GEGKLNIVTI YRAEKGMGAR HISFHPNGKI AYLVGELNST IEVLSYNEEK GRFARLQTIS TLPEDYHGAN GVAAIRISSD GKFLYASNRG HDSLAIYKVS PLGTKLEAIG WTKTEGHIPR DFNFNKTEDY IIVAHQESDN LTLFLRDKNT GSLTLEQKDF YAPEITCVLP L
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