Gene LACR_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1920 
SymbolaroB 
ID4433894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1815829 
End bp1816899 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content38% 
IMG OID639667620 
Product3-dehydroquinate synthase 
Protein accessionYP_811517 
Protein GI116512610 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.378131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ATGTAAATCT ACCAGACCAT CCCTATGATG TCATCATTGA AAATGGGGCC 
TTGGCTAATA TAGGAAATTG GGTTTCATCA TTGTGGAAAA AGCAAAAAAT TGTCTTGATT 
TCGGATAATC ATGTCAATGG GCTTTATGGT CAGAAAGTTG TTGAACAACT TGAAAAATCA 
GGTTTTGAAG TAGAAACTTT TGAATTTCCA GAGGGTGAAG CCAGTAAAAA TTTACTGACA 
GCCGAAAAAG CTTGGAATTT TTGTGCTGAG TTTGGACTGA CACGTTCTGA CGGAATTATT 
GCATTCGGTG GTGGAGTGAC AGGTGATTTA GCTGGTTTTG TTGCTTCAAC TTATATGCGA 
GGTATTCATT TCTTACAAAT TCCAACCAGT TTAACCGCGC AAGTTGATAG TTCTATTGGC 
GGGAAAACAG GGATTAACTC TAAAATGGCT AAAAATATGA TTGGTACATT TACACAACCA 
GATGGGGTGC TGATTGACCC AGAAGTTCTG AAAACATTAG GTCAAAGAGA GTTTTGTGAA 
GGCTTGGGAG AAGTCATTAA ATGTGCCCTA ATTGCTGATA AAGCCCTGTG GAATTTACTG 
ACAGATTTGT CAGCCAAAGA TTTACTGGAA AATTTTGCAA AAATTGAAGA AATTATTTAT 
CGGTCTTGTG AAGTAAAACG AAAAGTGGTT GTTGATGATG TGCTTGATAA TGGCGTGCGG 
CTTTATCTAA ATTTTGGACA TACGATTGGT CATGCTGTTG AAAATACGGC GGGTTATGGA 
AAAGTCATGC ACGGCGAAGC CGTTGCCATT GGGATGGTAC AAATCAGTAA AATTGCTGAG 
AAAAAAGGTC TCATGCCTCT CGGAATTACT GATGAAATCC GAAAGATGGT CAAAAAATAT 
GGTTTGCCTG ATGACTATCA ACCTTGGGAC GAGGCGCTTT TGTTTAAAGC TCTCACTCAC 
GATAAAAAAG CGCGTGGAAC AATCATCAAA ACAGTTATTG TCCCTGAAAT TGGTACTGCC 
AAAATCAATG AAGTGACTTT TGAAGAAATG AAAGAATATC TCAAAAAATA A
 
Protein sequence
MKLNVNLPDH PYDVIIENGA LANIGNWVSS LWKKQKIVLI SDNHVNGLYG QKVVEQLEKS 
GFEVETFEFP EGEASKNLLT AEKAWNFCAE FGLTRSDGII AFGGGVTGDL AGFVASTYMR 
GIHFLQIPTS LTAQVDSSIG GKTGINSKMA KNMIGTFTQP DGVLIDPEVL KTLGQREFCE 
GLGEVIKCAL IADKALWNLL TDLSAKDLLE NFAKIEEIIY RSCEVKRKVV VDDVLDNGVR 
LYLNFGHTIG HAVENTAGYG KVMHGEAVAI GMVQISKIAE KKGLMPLGIT DEIRKMVKKY 
GLPDDYQPWD EALLFKALTH DKKARGTIIK TVIVPEIGTA KINEVTFEEM KEYLKK