Gene LACR_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1898 
Symbol 
ID4434562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand+ 
Start bp1795007 
End bp1795690 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content38% 
IMG OID639667598 
Producthypothetical protein 
Protein accessionYP_811495 
Protein GI116512588 
COG category[S] Function unknown 
COG ID[COG1556] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.482836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGGAA CTATTGAAAA TCGTACAAAA TTCTTGGAAA CTTTGTTTGA AAAAAGTGGC 
GGTGTGGAAC TTCCCTTTGA GCCTTATGTG CCAATTTCAG ATTTGCCTGA GACTCATTTA 
GCTGATTTGA CTTCTGATGA ATTGTTAGAA ATTTCCAAGG TTCAATCCGA ACGAGTCTCC 
GCAAATTTAG TTGAAACAAC TTCTTCTGAA ATGAATGAAG TCATTCGTCA ATTAATTGAA 
AAATATGGTG GTGGACAAGT CATGATTCCT ACAACAGATG AATTTAAAAA TTTAGGGGTA 
AATGTTAACT CTGAAAACTT GGTGAAATGG AAAATCGGCA AAGAATTTCG TGATGAAAAT 
ATCACAGCCG CTCAAAATTC TAATGTTGTT GTAGCTGTTC CCAAATTTTT CCTTGCTGAA 
TCGGCAACCA TCGTGGTCGA GTCTGAAGCC GGTCAGGGGC GGTCATTGCA TTTTCTACCT 
ACGCATTATA TTTCTGTGAT TCCATTAAGT CGGATGTTGC CTCGTTTTAC TCAAGCTGCT 
GACTGGTTTG ATAAAAATAA GAAGCCTGGT TCCACTATTC ACTTTATTTC TGGTCCTTCA 
AATTCTGGAG ATATTGAAAT GCAACTTGTA GTCGGCCTTC ACGGTCCTCT AGAAATTAAC 
TATGTGATTG TTAAGGATTT ATAA
 
Protein sequence
MTGTIENRTK FLETLFEKSG GVELPFEPYV PISDLPETHL ADLTSDELLE ISKVQSERVS 
ANLVETTSSE MNEVIRQLIE KYGGGQVMIP TTDEFKNLGV NVNSENLVKW KIGKEFRDEN 
ITAAQNSNVV VAVPKFFLAE SATIVVESEA GQGRSLHFLP THYISVIPLS RMLPRFTQAA 
DWFDKNKKPG STIHFISGPS NSGDIEMQLV VGLHGPLEIN YVIVKDL