Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1859 |
Symbol | |
ID | 4433488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | - |
Start bp | 1757582 |
End bp | 1758973 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639667562 |
Product | transcriptional regulator |
Protein accession | YP_811459 |
Protein GI | 116512552 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00497652 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATGA ATGAAAAAAA GTATAAACGC TTAGAATATT TGAGACATAA TATCGATTAT CTCACAATTA GAGAGCGTCA AGAGTACTAT GAGTTACTCA ATGAACTGAA AAAAGAAGGA AATTATTCTG AATCTGAAGA ATTTGAAGAA TATACAGAAC CAGAATATTC CGATTATGAA TCAGAAAATT TTCAACAAAG AGATTTGGAA TCACCCTCTA ATAACTACAA TACTAATAGA AGAAATACAC GAGAAAGTAG CCCAAGCCCA GAAAAAAATA GAAATAAAAT TTCTACAGGC AACAAAGGTT CCAAAAAGGC GAAATCTGGT AAGAAAAAGA AGCGACATTG GTTGAGAACA ATATTTGGAA TTATTATCTT GATTATTGTG CTTATGGTTG GTTTCTTTGT GTACGGCTAT CAACGCGGAG TCAAGCATGA AGGAAGTCCT GCAAAACAAG AAAAATTTAC AAGTTTGAAA AACTCAGATG GTTCAGTAAA TATTTTGTTA CTTGGGGCTG ACCAAAGGCC CTGGCAATCT TCTGGTGTTG CTCATACGGA TAGTATTATG GTTTTACATG TTAATGGTAA AGACCATAAG ATACAAATTG TCAGCTTTAT GCGTGACACC CTTGTCAATA TTCCTGATGT AGCTTCAAGT GATAGTCCAG ATTCAAAAAT TAACTCTGCC TTCACAATTG GAGAACAATA TAACAAACAA GGTGTAAACC TGATGAGCGA GACATTGAAG AAAAATTTTG GCATTAATTG CCAATATTAC GCGGTAGTAG ATTTCTCAAG CTTTGCGACA ATTATTGATT CTTTATTCCC GACAGGCCTG AAAATTGATG CAAAATTCTC AACGGTAAAT GGTGAAACGC TATCAGCTGT ACCTGTACCC GATGACCTTG CTGCAACGGA AGGGAAAACT TCAAATGATA AAGACTTGAC TGCTGAAAAG GCTGCCGAAT TGGGTTATCC TGATGGTGGT GGTACATTTA TGATGATTAA ACCGGGAACT CAAAAGATGG ATGGTCGCAT GTTGTTAAAC TATGCTCGTT TCCGTCATGA TGATGAGGGA GATTATGGGC GTGTTAAGCG TCAACAACAA GTTTTAGAAA CAGTAATGTC TAAAATGAAA AATCCACTTG CTTTATTCAC TGCATCAAGT GCTCTTGGAA CGACAAGAGC CGTCACAATG ACCAATATTC CTAATTCTTT CTTCTTAACA AAGGGAATTA CAACCTTGTT TGATATGAAA AATGGAATTA ACTCAACAAC TATCCCGGCA GATAATGACT GGGAAAACGC TTATGACATG TATGGAGGTT TAGGACTTTC AATTGATATG ACAAAATACA AAGCGAAAGC TCAAGAACTC CTTGGCCAAT AA
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Protein sequence | MTMNEKKYKR LEYLRHNIDY LTIRERQEYY ELLNELKKEG NYSESEEFEE YTEPEYSDYE SENFQQRDLE SPSNNYNTNR RNTRESSPSP EKNRNKISTG NKGSKKAKSG KKKKRHWLRT IFGIIILIIV LMVGFFVYGY QRGVKHEGSP AKQEKFTSLK NSDGSVNILL LGADQRPWQS SGVAHTDSIM VLHVNGKDHK IQIVSFMRDT LVNIPDVASS DSPDSKINSA FTIGEQYNKQ GVNLMSETLK KNFGINCQYY AVVDFSSFAT IIDSLFPTGL KIDAKFSTVN GETLSAVPVP DDLAATEGKT SNDKDLTAEK AAELGYPDGG GTFMMIKPGT QKMDGRMLLN YARFRHDDEG DYGRVKRQQQ VLETVMSKMK NPLALFTASS ALGTTRAVTM TNIPNSFFLT KGITTLFDMK NGINSTTIPA DNDWENAYDM YGGLGLSIDM TKYKAKAQEL LGQ
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