| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1628 |
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| Symbol | |
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| ID | 4434107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1538294 |
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| End bp | 1539667 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639667338 |
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| Product | major facilitator superfamily permease |
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| Protein accession | YP_809548 |
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| Protein GI | 116512332 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.139658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAG AATTAGAAAA AAATAAAGCG AATCATAAAA TTAGCGCGAA AACGCGCTTT
TCGATTGTCG CTGTGGCTCT TGTGGCCTTT ATGGGGATAT TGGCGGAAAC AAGTCTGAAT
GTGACTTTCC CCACGCTTGA GAAAACTTTT GGACTTCCAC TAAGTACGGT TCAATGGGTG
ACGACAGCTT ATTTGCTTGT TGTTGCTATT GTTATGCCTA CAAGTTCATA CATCAGCCAA
CGTTTTCAAA ACCGAACCTT GTTTTTTGCA GGATTAATCT TCTTTACTAT CGGTGATTTA
TTGAGTTTAA TTTCATCAAA TTTTACTATT TTGATGGCTG GACGTTTGAT TCAAGGGATT
GGGACTGGGA TTGCAATTCC TTTAATGTTT AATCTTGTCT TGACTAAAAT TCCTCGTGAA
CGGGTTGGTC TTTGGATGGG ATTTGCTGGT ATGATTTTGA GTATTGCACC CGCACTTGGC
CCAACTTATG GGGGGCTTTT AACGGGAACT CTTGGCTGGC GAATGATTTT TGCAATTATT
TTAATTATCC CAATCTGCTT ATTTCCTTTG GGAGCTTGGG CTATTGAAAA GAGTGAAAAA
ACTCGTCCAG GTAAATTTGA TTTTATCGCT TTTATTTTCT TATCACTTGT GATGACCAGT
GCCCTTTTAG CTTTAGATTC ATTATCAAGT GCTCATTTTT CATGGATTTG GTTAATCCTC
TTTATTATTG GATTAATTGC CTTTATTTGG CGTTCAAAAA CAAGTTCTTC GAATTTTATA
GATATCAATG TCTTTAAGAG TCCAACCTTT ACTTTGTCAG TCCTTGTTTA TTGTATTTTA
CAATTTGTAA ATTTGGGTAT TAACTTTATC ATCCCTAATT TCTTACAGGT TTCTCTTGGT
GCCACAAGTA CCTTGGCAGG TTTTGCTTTA TTACCTGGTT CATTAATTGG TTCAGCGGCG
CAAGGACCAA TCGGTGCACT TTATGACCGA AAAGGGGCCA AGGGTATCTT ATATAGCGGG
AACACTGTTT TCTTCATTGC ACTTGTATTG TTAACGATTT TTACTAAAAA TCTAACTTTA
CTGGGTGTGA TGGGACTTTA TGTTGTATTC ACAATCGGAC GTTCGTCAAG CTTTGCAACG
ACAATGACCA ATAGTCTAGC TCAACTCCCG CATGATAAAG CCGCTTCTGG AAATGCTTGG
TTTACTACGA CTTCTCAATT TGCGGCATCA GCAGGGACGG CGACGGCCAG TCTGATTGCA
ACAAAATCAA GTAATTTAAC AACCGGAACT CAACATGTAT TTATGTTTTT CCTTTGTCTT
GCTTTACTTA ACTTTGTTTT CTATACTTTG ATTTTGAATA AAAAAATAAA ATAA
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| Protein sequence | MNRELEKNKA NHKISAKTRF SIVAVALVAF MGILAETSLN VTFPTLEKTF GLPLSTVQWV
TTAYLLVVAI VMPTSSYISQ RFQNRTLFFA GLIFFTIGDL LSLISSNFTI LMAGRLIQGI
GTGIAIPLMF NLVLTKIPRE RVGLWMGFAG MILSIAPALG PTYGGLLTGT LGWRMIFAII
LIIPICLFPL GAWAIEKSEK TRPGKFDFIA FIFLSLVMTS ALLALDSLSS AHFSWIWLIL
FIIGLIAFIW RSKTSSSNFI DINVFKSPTF TLSVLVYCIL QFVNLGINFI IPNFLQVSLG
ATSTLAGFAL LPGSLIGSAA QGPIGALYDR KGAKGILYSG NTVFFIALVL LTIFTKNLTL
LGVMGLYVVF TIGRSSSFAT TMTNSLAQLP HDKAASGNAW FTTTSQFAAS AGTATASLIA
TKSSNLTTGT QHVFMFFLCL ALLNFVFYTL ILNKKIK
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