| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1548 |
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| Symbol | trpA |
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| ID | 4433540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1466345 |
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| End bp | 1467106 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639667266 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_809476 |
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| Protein GI | 116512260 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTT TACAAGCAAA ATTGAGCAAT AAAAAAAATA ATTTTGTTCC CTATATTATG
GCAGGTGACC ATGAAAGAGG ATTAGAAGGG CTCAATGAAA CCATTCAACT TCTTGAACAA
GCCGGGAGTT CTGCCATTGA AATTGGTGTA CCCTTCTCAG ACCCCGTTGC TGACGGACCA
GTAATTGAAC AAGCTGGCTT ACGAGCCTTA GCCAAAAATG TTTCACTATC AAAGATTCTT
GACAGCTTAA AATCAATTGA AACAGAAGTT CCTCTTGTCA TTATGACTTA TTTTAATCCT
GTCTATCAGT TTGGAATTGA AAATTTTGTT GCAGCTCTTG AGAATACAGC AGTAAAAGGT
CTAATTATTC CTGATTTACC TAAAGAACAT GAAGCTTACA TTAAGCCTTT TATTACTGAT
AAGGATATTT GCTTAGTACC TTTGGTGTCA TTAACCACAC CAATTTCTCG TCAGAAAGAA
CTTGTAGTAG ATGCCGAAGG ATTCATTTAT GCCGTTGCGA TCAATGGAGT AACCGGAAAA
GAAAATGCTT ATAGTAATCA ACTTGACCAT CATTTAGAAA CATTGTCTAA ATTAACTGAT
ATTCCTGTTT TGACAGGATT TGGGATTTCA ACTTTAACAG ATGTTGAACG TTTTAATAAG
GTATCAGCAG GAGTAATCGT TGGTTCAAAA ATAGTTAGGG ATTTACACGA AAACAAAGAA
AGTGATGTTA TTAAATTTAT TAAAAACGCA ATCAATTTTT AA
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| Protein sequence | MKTLQAKLSN KKNNFVPYIM AGDHERGLEG LNETIQLLEQ AGSSAIEIGV PFSDPVADGP
VIEQAGLRAL AKNVSLSKIL DSLKSIETEV PLVIMTYFNP VYQFGIENFV AALENTAVKG
LIIPDLPKEH EAYIKPFITD KDICLVPLVS LTTPISRQKE LVVDAEGFIY AVAINGVTGK
ENAYSNQLDH HLETLSKLTD IPVLTGFGIS TLTDVERFNK VSAGVIVGSK IVRDLHENKE
SDVIKFIKNA INF
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