| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1541 |
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| Symbol | |
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| ID | 4433533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 1457897 |
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| End bp | 1459618 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 639667260 |
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| Product | ABC-type proline/glycine betaine transport system, permease component |
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| Protein accession | YP_809470 |
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| Protein GI | 116512254 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components
[COG4176] ABC-type proline/glycine betaine transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.11623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGATT TAGTGATTGG AAAAATACCA TTAGCCAACT GGGTATCGTC AGCAACAGAT
TGGATTACAA GTACATTTAG TTCGGGTTTT GATGTGATTC AAAAATCAGG AACAGTGTTG
ATGAACGGAA TAACAGGTGC TTTAACTGCA GTTCCATTCT GGCTGATGAT TGCTGTTGTT
ACTATCCTAG CAATTTTGGT TTCAGGTAAA AAGTTTGCCT TCCCATTGTT TACTTTTATT
GGTCTTTGTT TAATTGCCAA TCAAGGCTTA TGGTCAGATT TGATGAGTAC GATTACCCTT
GTCTTACTTT CAAGTTTGTT ATCAATTATC ATAGGGGTCC CTCTAGGAAT TTGGATGGCA
AAATCTGAAC TAGTAGCTAA GATTGTTCAA CCTATATTGG ACTTCATGCA AACCATGCCT
GGTTTTGTTT ATTTGATTCC AGCAGTTGCC TTCTTTGGTA TTGGGGTTGT TCCTGGGGTA
TTTGCTTCAG TAATCTTTGC TTTGCCACCG ACTGTCAGAA TGACTAACTT AGGTATTCGC
CAAGTTTCAA CTGAATTAGT TGAAGCAGCA GATTCATTTG GTTCGACTGC CCGTCAGAAG
TTATTTAAAT TGGAATTTCC TTTAGCTAAA GGAACAATTA TGGCTGGTGT TAACCAAACA
ATTATGTTGG CTCTTTCTAT GGTCGTTATT GCCTCTATGA TTGGTGCACC TGGTTTAGGT
CGTGGAGTAC TAGCTGCTGT TCAATCAGCT GATATTGGTA AGGGATTTGT AAGTGGGATT
TCATTAGTTA TTTTGGCTAT TATTATTGAC CGCTTTACGC AAAAACTTAA TGTTTCTCCT
TTAGAAAAAC AAGGAAATCC TAAGCTCAAA AAATGGAAAC GTTGGATTGC TATCGTTTCA
TTGTTAGCCT TAATTGTTGG TGCTTTTTCG GGAATGTCTT TTGGGAAAAA ATCTTCTGAT
AAAAAAGTGG ATTTAGTTTA TATGAACTGG GACTCAGAAG TTGCGTCAAT CAATGTTTTG
ACCCAAGCAA TGGAAGAACA TAGTTTTGAT GTTACAACGA CTGCACTTGA TAACGCAGTT
GCTTGGCAAA CTGTGGCTAA TAGTCAAGCT GATGGAATGG TTTCTGCTTG GTTGCCAAAC
ACTCATAAGA CCCAATGGAA AAAATATGGT AAGTCTGTTG AGTTATTAGG TCCAAATCTT
AAAGGCGCTA AAGTAGGATT TGTTGTGCCA AGTTATATGA ATGTGAATTC AATTGAAGAT
TTGACTAATC AGGCCAATAA AACAATCACA GGAATTGAGC CTGGTGCAGG TGTCATGGCT
GCCAGTGAAA ATACACTTAA GAGCTATAGT AATCTTAAAG ATTGGAAGCT TGTTCCTTCA
TCATCTGGTG CAATGACTGT TGCTCTTGGT GAAGCCATTA AACAACATAA AGACATTGTA
ATCACTGGTT GGTCTCCTCA TTGGATGTTC AATAAATATG ATTTGAAATA CTTAGCTGAT
CCGAAAGGAA CAATGGGGAC TTCAGAAAAT ATTAATACAA TTGTGCGCAA AGGATTGAAA
AAAGAAAATC CTGAAGCTTA TAAGGTTTTG AATAATTTTA ATTGGACCAC TAAAGATATG
GAATCTGTTA TGCTTGATAT TCAAAATGGT AAGACACCAG AAGCAGCTGC AAAAGCTTGG
ATTAAAGACC ATCAAAAACA AGTTGATAAA TGGTTTAAAT AA
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| Protein sequence | MIDLVIGKIP LANWVSSATD WITSTFSSGF DVIQKSGTVL MNGITGALTA VPFWLMIAVV
TILAILVSGK KFAFPLFTFI GLCLIANQGL WSDLMSTITL VLLSSLLSII IGVPLGIWMA
KSELVAKIVQ PILDFMQTMP GFVYLIPAVA FFGIGVVPGV FASVIFALPP TVRMTNLGIR
QVSTELVEAA DSFGSTARQK LFKLEFPLAK GTIMAGVNQT IMLALSMVVI ASMIGAPGLG
RGVLAAVQSA DIGKGFVSGI SLVILAIIID RFTQKLNVSP LEKQGNPKLK KWKRWIAIVS
LLALIVGAFS GMSFGKKSSD KKVDLVYMNW DSEVASINVL TQAMEEHSFD VTTTALDNAV
AWQTVANSQA DGMVSAWLPN THKTQWKKYG KSVELLGPNL KGAKVGFVVP SYMNVNSIED
LTNQANKTIT GIEPGAGVMA ASENTLKSYS NLKDWKLVPS SSGAMTVALG EAIKQHKDIV
ITGWSPHWMF NKYDLKYLAD PKGTMGTSEN INTIVRKGLK KENPEAYKVL NNFNWTTKDM
ESVMLDIQNG KTPEAAAKAW IKDHQKQVDK WFK
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