| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_1454 |
|---|
| Symbol | |
|---|
| ID | 4433212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 1375648 |
|---|
| End bp | 1376601 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 639667176 |
|---|
| Product | ABC transporter permease |
|---|
| Protein accession | YP_809386 |
|---|
| Protein GI | 116512170 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTCG TAAACACTTT ACAGATTATT GTCGCTAATA TGCTCATCTA TTCAACACCT
CTAATCTTTA CAAGTATTGG TGGTGTCTTC TCCGAACGAG GCGGAATCGT CAATGTCGGT
CTCGAAGGAA TAATGACTAT CGGGGCCTTT AGTTCCGTTG TCTTCAACTT AACTACTGCC
GGGATGTTTG GAAGCATGAC TCCTTGGCTC TCAATCCTCT TTGGAGCTTT AATCGGTGCG
CTCTTCTCTT CTCTACACGC GGTTGCTACC GTCAACCTAA GAGCAGACCA TATCGTATCT
GGGACCGTAC TTAACTTGAT GGCTCCAGCA CTTGGAGTAT TCCTACTTCA AGTTTTCTAC
CAACAAGGTC AAATTAATAT CAATGAACAA ATTGGTTATT GGAATGTTCC TTTACTTTCT
AATATTCCTG TCATTGGTAA AATCTTCTTT ACTCAAACTT CACTCCCAGG TTTCCTTGCA
ATAGTTGTTG CAATTCTCGC TTGGTACGTC CTATTTAAAA CTCGCTTTGG TCTTCGCCTT
CGTTCTGTTG GTGAAAATCC TCAAGCAGCT GACACCCTTG GGATTAACGT TTATGCCTAT
CGTTGGGCAG GGGTACTTCT CTCTGGTGTT CTCGGAGGAG TTGGTGGAGC AATCTATGCT
CAAGCAATTT CTGGTAACTT CTCAGTTTCA ACTATTGCAG GACAAGGTTT CATTTCGCTT
GCAGCCATGA TTTTTGGTAA ATGGAATCCA ATTGGAGCAA TGCTATCATC ACTTCTCTTT
GGACTCTTTA CTTCACTGGC CGTTGTCGGT GGTCAAATCC CAGGAATCAA AGAAATTCCT
TCTTCATTCC TACAAATGGC ACCTTATGTC TTTACAATTA TTGTCTTGGC ACTCTTCCTT
GGAAAAGCAA TTGCGCCTAA AGCTGACGGG GTAAACTATA TCAAATCGAA ATAA
|
|---|
| Protein sequence | MNVVNTLQII VANMLIYSTP LIFTSIGGVF SERGGIVNVG LEGIMTIGAF SSVVFNLTTA
GMFGSMTPWL SILFGALIGA LFSSLHAVAT VNLRADHIVS GTVLNLMAPA LGVFLLQVFY
QQGQININEQ IGYWNVPLLS NIPVIGKIFF TQTSLPGFLA IVVAILAWYV LFKTRFGLRL
RSVGENPQAA DTLGINVYAY RWAGVLLSGV LGGVGGAIYA QAISGNFSVS TIAGQGFISL
AAMIFGKWNP IGAMLSSLLF GLFTSLAVVG GQIPGIKEIP SSFLQMAPYV FTIIVLALFL
GKAIAPKADG VNYIKSK
|
|---|
| |