Gene LACR_1397 details

Gene Information

• Locus tag: LACR_1397
• Symbol: scpB
• ID: 4434051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: -
• Start bp: 1308287
• End bp: 1308853
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 639667125
• Product: segregation and condensation protein B
• Protein accession: YP_809335
• Protein GI: 116512119
• COG category: [K] Transcription
• COG ID: [COG1386] Predicted transcriptional regulator containing the HTH domain
• TIGRFAM ID: [TIGR00281] segregation and condensation protein B

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.186018
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATAAGA CAGCGACATG TGAACTTTTA CTTTTTGTAT CTGGAGAAGC TGGTTTAACA 
TTGACAGAGT TGTCATCACT GACAGAAATG TCTAAACAAG CTTGTCAGCA ACAAATTGAT 
TATTTGAAAG AAAAATATCA TTCTGATAGA GAATCAGCTT TGACAATTAT TGAAACGGCT 
GGAAAATATC GTATGGCCAC AAAAGAAGAC TTTTCAGAGA TTCTTAAAAA TTATGCGAAA 
ACCCCACTTA ACCAATCTTT GTCAAAATCT GCTCTAGAAG TTCTTTCAAT AATTGCTTAC 
AAACAACCAT TAACGCGTAT TGAGATTGAT CAATTACGTG GAGTTAACTC GTCAGGTGTT 
CTATCTACGC TTCGTGCTTT TGATTTAGTT GAAAAAGTAG GGCAAGTTGA AGCACCGGGA 
CGTCCTAGCC TTTATGCGAC TACTGAATTT TTCCTAGATT ATATTGGTAT TAATAATTTA 
GAAGAATTAC CTGAAATTGA TGAGTCAAGA TATGTGGCAG AACAACAAAC CCTATTTAAC 
GAAAGTGAAG AAAATGAGAA TCAATAA 

 

Protein sequence

MNKTATCELL LFVSGEAGLT LTELSSLTEM SKQACQQQID YLKEKYHSDR ESALTIIETA 
GKYRMATKED FSEILKNYAK TPLNQSLSKS ALEVLSIIAY KQPLTRIEID QLRGVNSSGV 
LSTLRAFDLV EKVGQVEAPG RPSLYATTEF FLDYIGINNL EELPEIDESR YVAEQQTLFN 
ESEENENQ