Gene LACR_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLACR_1320 
Symbol 
ID4432474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactococcus lactis subsp. cremoris SK11 
KingdomBacteria 
Replicon accessionNC_008527 
Strand- 
Start bp1229147 
End bp1230178 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content49% 
IMG OID639667056 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_809266 
Protein GI116512050 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA AAATTGTAAC CTTATCAGGC GATGGTATCG GCCCTGAGAT TATAAATGCG 
GGACTGCAAG TCCTGTCTGC AGTAGCTGAG AAAATCGGCT TTGACTATGA ATTGGACGCG 
AAAGATTTTG GAGGCGCAGC GATTGACAAA TTTGGTGTGC CATTGCCTGA TGAAACGCTT 
GAAGCGGCGC GCAATGCGGA TGCGATTTTA CATGCCGCGA TTGGCGACCC GAAATTTGAC 
GGCGCGGAAA TTCGCCCTGA GCAGGGATTA CTCAAAATTC GTAAGGAGTT AGGCTTGTTT 
GCCAATGTCC GTCCTTTGAA AATTTATGAA CCATTGAAAC ATTTGTCGCC CATTAAAAAT 
GTCGAAAATG TGGATTTTGT GACCATTCGT GAGCTGACAG GCGGGGTGTA TTTCGGCGAG 
CATACGCTTG AAGCTGACAA AGCGCGGGAC ATCAACGATT ACACACGTAT CGAGATTGAG 
CGTGTGGTTC GATTTGCTTT TGAAACGGCG CAAAAACGCC CACGTAAGCA GGTTACGAGC 
GTGGATAAAC AAAATGTCCT TGCCACCTCA AAACTTTGGC GCAAGACGGT GGACGAGGTC 
GCGAAAGACT ATCCTGACGT GACTTACGAG CATCAGTTGG TTGACTCTTG CGCCATGCTC 
CTGATTACCA ATCCGCAGAA ATTTGACGTG ATTGTAACGG AAAATCTCTT TGGCGACATT 
TTGACGGACG AGGCGTCAAG TTTGGCGGGG ACTCTAGGGT GTAGCGCGTC AAGTTCGCAT 
GGTGCGGGGA CGGCATTTTA CGAGCCTATC CACGGCTCTG CGCCTGACAT CGCAGGTAAA 
GGCATTGCCA ACCCTGTCAG CATGATTTTG TCGGTCGCCA TGATGTTGCG CGAGAGTTTT 
GAGTTGGAAA ATGGTGCGGT GCTGATTGAG CGTGCGGTCG AAAAAACGCT TGCTGACGGT 
ATTTTCACGC AAGATTTGGG TGGAAGTGCG ACGACGGATG AGATGACAAA GGCGATTTTG 
GAGCGGTTGT AA
 
Protein sequence
MTKKIVTLSG DGIGPEIINA GLQVLSAVAE KIGFDYELDA KDFGGAAIDK FGVPLPDETL 
EAARNADAIL HAAIGDPKFD GAEIRPEQGL LKIRKELGLF ANVRPLKIYE PLKHLSPIKN 
VENVDFVTIR ELTGGVYFGE HTLEADKARD INDYTRIEIE RVVRFAFETA QKRPRKQVTS 
VDKQNVLATS KLWRKTVDEV AKDYPDVTYE HQLVDSCAML LITNPQKFDV IVTENLFGDI 
LTDEASSLAG TLGCSASSSH GAGTAFYEPI HGSAPDIAGK GIANPVSMIL SVAMMLRESF 
ELENGAVLIE RAVEKTLADG IFTQDLGGSA TTDEMTKAIL ERL