Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_1199 |
Symbol | |
ID | 4432674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 1111434 |
End bp | 1112645 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639666943 |
Product | chloride channel protein EriC |
Protein accession | YP_809153 |
Protein GI | 116511937 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00235154 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTTT TTAAAGTAGG AATTTCCAGA AGTGCAATTT TATATGTCTT CTTAGCTGTA ATTATTGGTG GCTTAATTGG GGTGGTTGAT GCGATTTTTG GTCGAGGTCT TATCTATATT ACCGAATTTA GAGATGGACA TGCCCTTTAT TTGATTCCAT TTTTAACTTT AGCTGGTCTC TTGATTGTCT ATCTCTATAA AAATTTTGGT AAAGATAGTC AAAAAGGCAT GGGACTAATT TTTGAAGCGG GAAATCATGG GCGAGAAGAT ATTCCAAAGC GTCTTGTTCC GCTGATTGTT TTCTCAACTT GGCTTTCTCA TTTATTTGGT GCCAGTGTCG GACGTGAAGG GGTTGCCGTT CAAATCGGTG GCGTCATTGG TCATGCGATT GGTAAAAAAC TTTCAGCAAA AGAAGCTAAA AAGATTCTTT TGATTACTGG TATGGCTGCT GGTTTTGCTG CTCTTTTTCA AACGCCAATC GCGGCAACTT TTTTTGCCAT TGAAATTTTG ATGTTAGGAA AAATAGAATA CAGAGCTTTG ATTCCAGCCT TAGTTGGTTC CTATGTCGCA AGTTGGACTT CAAATTATCT AGGATTAGAA AAATTTTCTT TCGCGATCAA TACTAACATT CATCTTGACC CCTTAGTTCT TTTAAAATTG GCCATCATCG CAGTATGTTT TGGCTTGGTG GGGAGATTTT TTGCAGAATC TCTAGCCTTT ATGAAAGCAA CAGTTGCAAA AAGAATTGCT AATCCTTATC AAAGAATTAT TTTAATGGGA ATTGTCATCT CGATTGGTTT ACTCGTTATT CATATGGATC GTTATGCTGG TCTTGGGACG AATTTGATTG GTTTGAGTTT TAATGGTGGT CATATCAATG GATATGATTG GATTTTAAAA TTGATCTTTA CGGTTTTGTC TATTTCTGCA GGGTTCCAAG GAGGGGAAGT GACACCGCTT TTTGCGATTG GTTCCACACT AGGTGCGGCT TTGGCAATGC TGTTTGGTTT GCCTGTTGAA TTTGTAGCAG CTGCAGGTTA TGTTTCAATC TTTTCTGCTG CAACAAATTC ATATTTTGGA CCTATCTTTA TTGCCGCCGA GGTCTTTGGC TTTGGTTCAG TTCAATATAT TTTACCAATT ATGACTATCG CTTATGTTTT GAATGGAAAT TCATCAATTT ACGCACAAGA AGTTCTAAAT TTGGAAGTTT AA
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Protein sequence | MNFFKVGISR SAILYVFLAV IIGGLIGVVD AIFGRGLIYI TEFRDGHALY LIPFLTLAGL LIVYLYKNFG KDSQKGMGLI FEAGNHGRED IPKRLVPLIV FSTWLSHLFG ASVGREGVAV QIGGVIGHAI GKKLSAKEAK KILLITGMAA GFAALFQTPI AATFFAIEIL MLGKIEYRAL IPALVGSYVA SWTSNYLGLE KFSFAINTNI HLDPLVLLKL AIIAVCFGLV GRFFAESLAF MKATVAKRIA NPYQRIILMG IVISIGLLVI HMDRYAGLGT NLIGLSFNGG HINGYDWILK LIFTVLSISA GFQGGEVTPL FAIGSTLGAA LAMLFGLPVE FVAAAGYVSI FSAATNSYFG PIFIAAEVFG FGSVQYILPI MTIAYVLNGN SSIYAQEVLN LEV
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