Gene LACR_1057 details

Gene Information

• Locus tag: LACR_1057
• Symbol: prfB
• ID: 4432490
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactococcus lactis subsp. cremoris SK11
• Kingdom: Bacteria
• Replicon accession: NC_008527
• Strand: +
• Start bp: 998640
• End bp: 999737
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 639666805
• Product: peptide chain release factor 2
• Protein accession: YP_809016
• Protein GI: 116511800
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1186] Protein chain release factor B
• TIGRFAM ID: [TIGR00020] peptide chain release factor 2

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTAT CAGAAATTAG AAATTTACTT GAAGGGTATA GCGAGAAGAT TAATGGCTTT 
CGTGACTCCT TAGATCTTGA CCGTTTGGAA GAAGAAATTG CTTTATTAGA AAATGATATG 
GCGCAGCCTG AATTTTGGAA TGATCAAGCA GCGGCTCAAA AAGTAATTGA CGAATCAAAT 
GCTTTAAAAG CAAAATACGA CAATTATCAA GCCATGAATA ACATGCTTGA AGAAGCTCAA 
ACCATGCTTG AAATGCTTCA GGAAGAAGCT GATGAAGACA TGCAAGTCGA ATTAGAAGAG 
ATGACCACAG CTCTTGGTCA AAAAATTGAA TCTTACGAAC TCGAAATCAT GCTTAATCAA 
CCCTATGACC ACATGAATGC GGTACTTGAA ATCCATCCAG GTTCTGGTGG AACAGAGTCG 
CAGGACTGGG GCTCAATGCT CATGCGGATG TATACCCGCT GGGGTGAAGC GCATGGCTTT 
AAAGTAGAAA TTTTGGACTA TCAAGATGGA GATGTTGCTG GACTTAAATC AGTAGCCATT 
CGTTTTGTTG GGCGAAATGC TTATGGTTTT TTGCGCGGCG AAAAAGGAGT TCATCGTTTA 
GTTCGCATAT CGCCATTTGA TTCTGCTAAT CGTCGTCATA CTTCATTTAC TTCAGTAGAC 
GTGATGCCAG AACTGGATGA TTCAATTGAA GTTGAAGTTC GTGATGCTGA TGTGAAAATG 
GATACCTTCC GTTCTGGAGG AGCAGGTGGA CAAAATGTCA ATAAAGTATC CACAGGGGTT 
CGCTTGACTC ACGTTCCAAC AGGGATTGTT GTCCAATCAA CAATGGATAG AACACAATAT 
GGTAACCGTG ACAAGGCCAT GGCTATGTTG AAGTCAAAAC TCTATCAATT AGAAATGGAT 
AAAAAGCAAG CAGAAGTTGA TGAACTTCGA GGAGACCAAT CAGAAATCTC TTGGGGAAGT 
CAAATTCGTT CTTATGTTTT CATGCCATAT CAGTTAGTCA AAGACACACG GACTGGTTAT 
GAAACAGGAC AAATTTCAAA CGTTATGGAC GGTGAAATAG ACGGATTTAT CAATGCTTAC 
CTTCGTTGGA ACCTCTAA 

 

Protein sequence

MELSEIRNLL EGYSEKINGF RDSLDLDRLE EEIALLENDM AQPEFWNDQA AAQKVIDESN 
ALKAKYDNYQ AMNNMLEEAQ TMLEMLQEEA DEDMQVELEE MTTALGQKIE SYELEIMLNQ 
PYDHMNAVLE IHPGSGGTES QDWGSMLMRM YTRWGEAHGF KVEILDYQDG DVAGLKSVAI 
RFVGRNAYGF LRGEKGVHRL VRISPFDSAN RRHTSFTSVD VMPELDDSIE VEVRDADVKM 
DTFRSGGAGG QNVNKVSTGV RLTHVPTGIV VQSTMDRTQY GNRDKAMAML KSKLYQLEMD 
KKQAEVDELR GDQSEISWGS QIRSYVFMPY QLVKDTRTGY ETGQISNVMD GEIDGFINAY 
LRWNL