Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0932 |
Symbol | |
ID | 4433423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 877637 |
End bp | 878203 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 639666691 |
Product | hypothetical protein |
Protein accession | YP_808902 |
Protein GI | 116511686 |
COG category | [S] Function unknown |
COG ID | [COG3548] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000598079 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAA CGCGTTTAGA GGCATTTACA GATGCCATTA TTGCTATCAT CATGACTGTT TTGGTCTTGG AGTTAGTACG TCCTGATTCG GATAGTTTAC AAAGTTTTAT TGATTTACTT CCGCATCTTG GAGTTTATCT TGTAAGTTTT TTTATTTTAG CAATTTACTG GGTCAATCAT CATCATTTAT TTCAAAGTAT AAAAAAAATC AATGCAAAAG TTTTATGGAT TAATATCAGT TTTCTTTTCG TATTATCACT AATTCCTATT TTTTCAAACT GGGTATCAAT ATATCCCAAT TCATTTATTC CAGAACTAGG TTATGTCATT ATCTTTTTCT GTGGAAACTT CATCTACCTT CTATTAACAA GGGAATTATT AAAAATTAAT GGTCACCGTA AAACTTCTGA ATCAACTGTA AGAAAAAATA TCATCAGTGT TGGACTTAAT GTCATTAGCA TTATTCTTGG ATATTTTATT GCACCGGTGA TTATGCTCAT TGCTTCGGCG TTGATTTTTT CAATGTGGGT CATTCCAGAT AAGAACATTG AAAAAATGTT TAAATAA
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Protein sequence | MSKTRLEAFT DAIIAIIMTV LVLELVRPDS DSLQSFIDLL PHLGVYLVSF FILAIYWVNH HHLFQSIKKI NAKVLWINIS FLFVLSLIPI FSNWVSIYPN SFIPELGYVI IFFCGNFIYL LLTRELLKIN GHRKTSESTV RKNIISVGLN VISIILGYFI APVIMLIASA LIFSMWVIPD KNIEKMFK
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