| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0617 |
|---|
| Symbol | glyA |
|---|
| ID | 4434089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008527 |
|---|
| Strand | + |
|---|
| Start bp | 565406 |
|---|
| End bp | 566653 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639666393 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_808607 |
|---|
| Protein GI | 116511391 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTG ATAAAGAAGA TTTTGAAAGC TTTGACCCAG AATTGTGGGC GGCCATTCAT
GCTGAGGAAA TTCGCCAGCA ACAAAATATT GAATTAATTG CTTCTGAAAA TATTGTTTCA
AAGGCAGTGA TGGCAGCACA AGGTTCTGTT TTGACGAATA AATATGCCGA AGGATACCCA
GGGAAACGTT ACTATGGTGG TACAGAAGCG GTTGATGTTG TGGAAAATTT GGCAATTGAC
CGTGCAAAAG AACTTTTCGG TGCAAAATTT GTCAATGTTC AACCTCACTC AGGTTCTCAA
GCCAATGCTG CAGCCTATAT GGCATTAATT CAACCAGGAG ATACAGTTCT AGGAATGGAT
TTAAACGCTG GTGGTCATTT GACGCACGGA GCTTCAGTCA ATTTTTCAGG AAAAACTTAT
CATTTTGTCC CTTATGGGGT AAATCCTCAA ACAGAGCTTT TAGATTATGA AGAAATTCTT
AAAATTGCTA AAGAAGTTCA ACCTAAACTG ATTGTGGCAG GGGCTTCTGC CTATTCACGT
TTGATTGATT TTGCTAAATT CCGTCAGATT ACTGATAGCG TTGGTGCGAA ATTAATGGTT
GATATGGCTC ATATTGCTGG TTTAGTGGCT ACTGATGCTC ACCCCAATCC ACTTCCTTAT
GCTGATGTTG TCACAACAAC AACTCATAAA ACTTTAAGAG GCCCACGCGG TGGAATGATT
TTAACCAATG ATGAAGTCTT GGCTAAAAAA ATCAATTCTG CAATTTTCCC TGGAACGCAA
GGTGGACCTT TAGAACACGT GATTGCTGCT AAAGCAGTCG CTTTTAAAGA AGCACTTGAC
CCAGAATTTG CTACATATAT TGAACAAGTC ATTAAAAATA CTCAAGCAAT GGCTGATGAG
TTTGCTAAGG TTGAAGGACT ACGTTTGATT GCAGGAGGCT CAGATAATCA CTTACTTAAT
TTGAAGGTCT TAGATCTTGG AATTAATGGG AAAGAAGCAC AGGACTTATT AGATAGCGTT
CATATCACGC TTAATAAAGA GGCCATACCA GACGAAACTT TATCTCCATT TAAAACCTCA
GGAGTGCGAA TTGGTGCGGC AGCAATCACA TCAAGAGGAT TTAAGGAAGC TGAAGCTCGA
AAAGTTGCTC AATTAGTTTC TAATGCCTTG GTTAATCATG ACAACCAAGA AAAACTCGAA
GAAGTTAGAA AAGCTGCTTT AGAGTTAACA CATCAATTCC CATTATAA
|
|---|
| Protein sequence | MIFDKEDFES FDPELWAAIH AEEIRQQQNI ELIASENIVS KAVMAAQGSV LTNKYAEGYP
GKRYYGGTEA VDVVENLAID RAKELFGAKF VNVQPHSGSQ ANAAAYMALI QPGDTVLGMD
LNAGGHLTHG ASVNFSGKTY HFVPYGVNPQ TELLDYEEIL KIAKEVQPKL IVAGASAYSR
LIDFAKFRQI TDSVGAKLMV DMAHIAGLVA TDAHPNPLPY ADVVTTTTHK TLRGPRGGMI
LTNDEVLAKK INSAIFPGTQ GGPLEHVIAA KAVAFKEALD PEFATYIEQV IKNTQAMADE
FAKVEGLRLI AGGSDNHLLN LKVLDLGING KEAQDLLDSV HITLNKEAIP DETLSPFKTS
GVRIGAAAIT SRGFKEAEAR KVAQLVSNAL VNHDNQEKLE EVRKAALELT HQFPL
|
|---|
| |