Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | LACR_0467 |
Symbol | |
ID | 4433009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactococcus lactis subsp. cremoris SK11 |
Kingdom | Bacteria |
Replicon accession | NC_008527 |
Strand | + |
Start bp | 437557 |
End bp | 438285 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639666258 |
Product | transcriptional regulator |
Protein accession | YP_808492 |
Protein GI | 116511276 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00031412 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTT TTGGAAATGT TGACTTTCAA AAATTAACCT ATACAGAAAG GACTTGCTAC AGTTATCTTC GCGATAATGT TGATAAAATC CCTTATTTAC GCGTCCGTGA CATTGCTTTA GAGTCCCATG TTGGAACTTC AAGCGTCATG CGTTTAATAC ATAAAATGGG TTATGATTCA TACACGGATT TTAAAGAATA TATTATTGAT AAAAAAGAGC TGGAAAAAGG AATTTCTAAC ACTGCTATTC CTTTCTCATT AGATATTTTT TCAGGAGACG TTGAACAGCG TTTAGATAAT TTAGCGCAAC GTGTGATTGA AAGTGATAAT ATCATTTTTA CCGGAGTTGG CTCAAGTGGT TTAATCTGTG ATTATGCAGC TAGAAGATTA GCTGGTGTGG GCATTAATAC TTTTTCATTT AGCGATGTAA CTTATCCGAT TGCTTCAAAG TTGCAAAATA CAACCAATAC TTTAGTAATT GCTTTATCCA TTTCAGGTGA AACTAATGAA ATCATTGAAG TATTGACGAG TCTTCGGTCA AATAAAGATG TTTATATTTC GAGTATCACG CCCAAAATTA ATTCGAGTAT CGCCGAACTG AGTGATTTTG TCCTGACCTA TCGAATCAAT GAACACCGAA TTAACACGCA TTATGACTTA ACGAGTCAAT TACCTACGGT CTATTTGACA GAACGTTTAA CAGATCTCGT TTATCAACGT TCCCATTAA
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Protein sequence | MSFFGNVDFQ KLTYTERTCY SYLRDNVDKI PYLRVRDIAL ESHVGTSSVM RLIHKMGYDS YTDFKEYIID KKELEKGISN TAIPFSLDIF SGDVEQRLDN LAQRVIESDN IIFTGVGSSG LICDYAARRL AGVGINTFSF SDVTYPIASK LQNTTNTLVI ALSISGETNE IIEVLTSLRS NKDVYISSIT PKINSSIAEL SDFVLTYRIN EHRINTHYDL TSQLPTVYLT ERLTDLVYQR SH
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