| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_0324 |
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| Symbol | |
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| ID | 4434411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactococcus lactis subsp. cremoris SK11 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008527 |
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| Strand | - |
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| Start bp | 294757 |
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| End bp | 296442 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639666120 |
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| Product | mRNA degradation ribonuclease J1/J2enzyme |
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| Protein accession | YP_808354 |
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| Protein GI | 116511138 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
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| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAAC AACTTAAAAT AAAAGCTGAT GAAGTCGCAG TTTACGCCAT TGGCGGACTG
GGCGAAATCG GTAAAAACAC TTATGGCGTT GAATATAAAG ATGAAATCAT CATCATCGAC
GCCGGAATTA AATTCCCAGA AGACGATTTA TTAGGTGTTG ACTACGTCAT CCCTGATTAC
ACTTATATTG TTGAAAATAT CGACCGGATT AAAGGGCTCT TCATTACTCA CGGACACGAA
GACCATATCG GAGGAATTCC TTTCCTTTTG AAACAAGCCA ATATCCCTAT TTATGCTGGG
CCATTGTCAC TTGCACTCAT CCGTGGAAAG CTCGAAGAAC ACGGGCTTTT ACGTGATGCT
AAACTCTACG AAATCCACGC CGATTCAGTC ATTAAATTTA ATCACTTGAG TCTTGATTTC
TTCCGCACCA CTCACTCAAT TCCAGAACCT TTAGGAATTG TTGTAAATAC CCCTCAAGGT
AAAATTGTAG CGACCGGTGA CTTCAAGTTT GACTTCACAC CAGTGGGTGA ACCTGCTGAT
CTACATCGGA TGGCTGAACT TGGTAGCGAA GGTGTCTTAC TCCTTCTTTC TGATTCAACC
AATGCTGAAA TTCCAACTTT TTCACATTCT GAAAAAGTCG TTGGTGCAAG CATCATGAAA
ATTTTTGAAC GTATTGAAGG TCGGATTATT TTCGCTTCTT TTGCCTCAAA TATTTTCCGT
TTGCAACAAG CCGTTGATGG AGCAGTTAAG ACTGGGCGTA AAATCGTTGT CTTTGGTCGT
TCAATGGAAA AAGCCATTGT TAACGGTTTA GAACTTGGTT ATATCAAAGC GCCTAAGGGC
ACATTTATCG AACCAAATGA AGTCAATCAA TATGCTTCAC ATGAACTTTT GATTATGTGT
ACAGGTTCGC AAGGCGAACC AATGGCTGCA CTTTCAAGAA TTGCCAATGG CATGCACCGT
CATATTACCC TACAAATGGG CGATACCGTT GTCTTCTCAT CAAATGCGAT TCCTGGAAAT
ACTCATGGTG TTAACCAATT GATTAACAAA ATCGCTGAAG CTGGAGTTGA AGTCATTTAT
GGTAAGATGA ACAACATTCA CACTTCAGGT CACGGTGGAC AACAAGAACA AAAACTCATG
TTGCGTCTTA TCAAACCAAA ATACTTTATG CCTGTCCACG GTGAGTATCG TATGCTCAAA
ATTCATGCTG GACTTGCTCA AGATACTGGT GTCCCTAAAG AAAATTGTTT CATTCAAGAA
AACGGAGATG TCCTTGCACT GACTGCTGAC AGCGCCAGAT ATGCTGACCA TTTCCCGGCT
GCCGATACTT ATGTTGACGG TTCAGGAATT GGAGATGTCG GAAATGCCGT TCTCCATGAC
CGTCATGAAC TTTCAGAAGA CGGAATCGTT CTTGCAGTGG CAACCGTTGA CTTTAAAAAG
AAAACCGTTC TTGCTGGACC TGATATGCTC TCACGTGGAT TCATTTACAT GCGTGAGTCT
GGTGATTTGA TTCGTAGTGG CCAACGTGTC CTTTTCAATG CTATACGTGA AGCCATGCAT
GAAGAAAATG CTAATGAAGC GTCTGTAGCA CGTGCGATGC GTGAAGCACT CTCACCATTC
CTTTATAAAC AAACTGAGCG CTCACCACTT GTTGTTCCAA TGATTATGAC ACCTGATGAA
AAATAA
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| Protein sequence | MPKQLKIKAD EVAVYAIGGL GEIGKNTYGV EYKDEIIIID AGIKFPEDDL LGVDYVIPDY
TYIVENIDRI KGLFITHGHE DHIGGIPFLL KQANIPIYAG PLSLALIRGK LEEHGLLRDA
KLYEIHADSV IKFNHLSLDF FRTTHSIPEP LGIVVNTPQG KIVATGDFKF DFTPVGEPAD
LHRMAELGSE GVLLLLSDST NAEIPTFSHS EKVVGASIMK IFERIEGRII FASFASNIFR
LQQAVDGAVK TGRKIVVFGR SMEKAIVNGL ELGYIKAPKG TFIEPNEVNQ YASHELLIMC
TGSQGEPMAA LSRIANGMHR HITLQMGDTV VFSSNAIPGN THGVNQLINK IAEAGVEVIY
GKMNNIHTSG HGGQQEQKLM LRLIKPKYFM PVHGEYRMLK IHAGLAQDTG VPKENCFIQE
NGDVLALTAD SARYADHFPA ADTYVDGSGI GDVGNAVLHD RHELSEDGIV LAVATVDFKK
KTVLAGPDML SRGFIYMRES GDLIRSGQRV LFNAIREAMH EENANEASVA RAMREALSPF
LYKQTERSPL VVPMIMTPDE K
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