| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LACR_D18 |
|---|
| Symbol | |
|---|
| ID | 4405871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactococcus lactis subsp. cremoris SK11 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008506 |
|---|
| Strand | - |
|---|
| Start bp | 20179 |
|---|
| End bp | 21063 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639654619 |
|---|
| Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
|---|
| Protein accession | YP_796545 |
|---|
| Protein GI | 116326625 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.618821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAAA AAAAACACAA AAATTCTTTA TCATTAGTTC ACTCAATCAA AGAAGAACTA
AAAAAAGATA AATTAGCGAT GATTTCAACA ATTTTTCTAG TTGCTGTCTT TCTAATCGTT
TATATTTACT CGATGTTTTT AAAACAATCA AATTATGTTG ATGTGAATAT CATGGACCAA
TATCTGGCAC CGCTGACGAC TGGACATTTA CTAGGAACTG ATAATGGTGG ACGAGATATT
ATCATGATGT TAATGATTTC TGCACGAAAC TCTTTCAATA TCGCTTTTGC AGTTACACTC
ATTACTTTAG TTGTAGGAAA TATCTTAGGG GTAATTACGG GCTACTTTGG CGGAAGGTTT
GATTTAATCT TCATGCGTTT CACTGATTTT GTCATGATTT TACCATCAAT GATGATCATT
ATTGTTTTTG TAACTATCAT CCCACGGTTT AATTCTTGGT CTTTGATTGG GATTATCAGT
ATCTTTAGTT GGATAGGGAC AACGCGTCTG ATTCGGGCAA GAACAATGAC GGAAGTCAAT
CGAGATTATG TTCAAGCATC AAAAACTTCG GGAACCTCTG ATTTTAAAAT TATGTTTCGG
GAAATATGGC CCAACTTGTC CACCTTAGTC ATTGCTGAAG CAACGCTTGT TTTTGCTGGA
AATATTGGTT TAGAAACAGG ACTTTCTTTC TTAGGTTTTG GACTTCCAGC GGGGACACCA
TCTTTGGGAA CAATGATAAA TGAAGCGACT AATCCAGAAA CAATGACTGA TAAGCCTTGG
ACTTGGGTTC CAGCAACAGT GGTCATCCTA ATTGTGGTGC TTGCTATTAT CTTTATCGGA
AATGCACTAA GACGAGTGGC TGACCAAAGA CAAGCTACAA GATAA
|
|---|
| Protein sequence | MTEKKHKNSL SLVHSIKEEL KKDKLAMIST IFLVAVFLIV YIYSMFLKQS NYVDVNIMDQ
YLAPLTTGHL LGTDNGGRDI IMMLMISARN SFNIAFAVTL ITLVVGNILG VITGYFGGRF
DLIFMRFTDF VMILPSMMII IVFVTIIPRF NSWSLIGIIS IFSWIGTTRL IRARTMTEVN
RDYVQASKTS GTSDFKIMFR EIWPNLSTLV IAEATLVFAG NIGLETGLSF LGFGLPAGTP
SLGTMINEAT NPETMTDKPW TWVPATVVIL IVVLAIIFIG NALRRVADQR QATR
|
|---|
| |