| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_69310 |
|---|
| Symbol | |
|---|
| ID | 4384470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 6182616 |
|---|
| End bp | 6183245 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639328187 |
|---|
| Product | LysE family efflux protein |
|---|
| Protein accession | YP_793721 |
|---|
| Protein GI | 116053396 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCA GTACCTGGTT CGCCTTCTTT CTCGCCTGCT GGGCCATCAG CCTGTCGCCG
GGCGCCGGAG CCATCGCCTC GATGTCCTGC GGGTTGCAGT ACGGCTTTGC GCGAGGCTAC
TGGAACGCGC TGGGCCTGCA GATCGGCCTG GCCCTGCAGA TCGCCATCGT CGCCGCCGGC
GTCGGTGCGT TGCTGGCGAC CTCGGCACTG GCTTTCAGCC TGATCAAGTG GTTCGGCGTG
GCCTACCTGG TGTACCTGGC GGTGCGCCAG TGGCAGGCGC CGCCACAGGC CTTGAGCACC
GATGGCGAAC GGCCTCTGGG GCGACCGTTG ACCCTGGTGC TGCGTGGTTT CCTGGTCAAC
GCCAGCAATC CCAAGGCGGT GATCTTCATG CTCGCGGTGC TGCCGCAGTT CATCGACCCG
CACCAGCCGC TGCTGGCGCA GTACCTGATC ATGGGCGGCA CCATGATCGT CGTCGACCTG
ATCGTCATGG CCGGCTACAC CGGACTGGCT GCGCGCGTGC TACGGGTACT GCGTTCGCCG
CGCCAGCAGA AGCTGGTGAA CCGTACCTTC GCCAGCCTGT TCGTCGGCGC CGCGGGGCTG
CTGGCGACGG TACGCCGAGC GCCGCTCTGA
|
|---|
| Protein sequence | MLVSTWFAFF LACWAISLSP GAGAIASMSC GLQYGFARGY WNALGLQIGL ALQIAIVAAG
VGALLATSAL AFSLIKWFGV AYLVYLAVRQ WQAPPQALST DGERPLGRPL TLVLRGFLVN
ASNPKAVIFM LAVLPQFIDP HQPLLAQYLI MGGTMIVVDL IVMAGYTGLA ARVLRVLRSP
RQQKLVNRTF ASLFVGAAGL LATVRRAPL
|
|---|
| |