Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_68820 |
Symbol | |
ID | 4385384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6137440 |
End bp | 6139224 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639328148 |
Product | putative secretion pathway ATPase |
Protein accession | YP_793682 |
Protein GI | 116053358 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGTGT TCGCCACCGC CGCCCAGGAC CGCCTGCTGG ACCTCGGCGA CCTGCTCCGC GAGCTGGTCG CCCAGGGCCG GGTCGGGCAG GAGCAGGCCG AACAGTGCCT GGCGATCCGC CGCAGCGCAG TGCGCAACCA GCAGCATCCG CTGGAGTTCC TCGCCGCGCA GCAGGTCGAG GATCTCAAGC GCCCCGGACG CAAGCTCGAC CTGGAGACCC TCACCCAGTG GCTGGCCGAG TACGCCGGCC AGCCCTACCT GCGCATCGAC CCGCTGAAGA TCGACGTCGC CGCGGTGACT CCGCTGATGT CCTACGCCTT CGCCCAGCGC CATGGCATCC TCGCCGTCGC GCTGAGTCCG GAGGAAGTCA CCATCGCCAG CGCCCAGCCC TTCGTACAGG GCTGGGAAAG CAACCTGGTG CATGTGCTCA AGCGACCGAT CAAGCGGGTG GTGGCGAACC CGGCGGACAT CCAGCGCTAC ACCGTCGAGT TCTTCCGCCT GGCCCGCTCG GTCAGCGGCG CCACCTCGCC GGACCAGAAG ATCAGCGGCG TCGGCAACTT CGAGCAGTTG CTCAACCTCG GCGCCGCCGA CCAGGAGCCG GACGCCAACG ACGCGCACAT CGTCACCATC GTCGACTGGC TGTTCCAGTA CGCCTTCCAG CAGCGCGCCA GCGACATCCA CATCGAGCCG CGCCGCGAGC AGGGCACCGT GCGCTTCCGT ATCGACGGCG TGCTGCACAA CGTCTACCAG TTCCCGCCGC AGGTGACCAT GGCGGTGGTC AGCCGCCTGA AGTCGCTGGG ACGGATGAAC GTGGCGGAGA AACGCAAGCC GCAGGACGGC CGGGTCAAGA CCAAGACCCC GGACGGCGCC GAGGTGGAGC TGCGCCTGTC GACCCTGCCC ACCGCCTTCG GCGAGAAGAT GGTGATGCGC ATCTTCGACC CCGAGGTGCT GCTCAAGAGC TTCGACCAGC TCGGCTTCTC CGCCGACGAC CTGCGCCGCT GGCAGAGCAT GACCAGCCAG CCCAACGGCA TCATCCTGGT CACCGGCCCC ACCGGCTCGG GCAAGACCAC CACGCTCTAC ACCACGCTCA AGCAACTGGC CACCGATGAG GTGAACGTCT GCACCATCGA GGACCCGATC GAGATGATCG AGCCCTCGTT CAACCAGATG CAGGTCCAGC ACAACATCGA CCTGACCTTC GCCAGCGGCG TACGCGCCCT GCTGCGGCAG GACCCGGACA TCATCATGGT CGGCGAGATC CGCGACCTGG AGACCGCCGA GATGGCGATC CAGGCGGCGC TCACCGGGCA CCTGGTGCTC TCCACCCTGC ACACCAACGA CTCGCCCACG GCGATCACCC GCCTGCTCGA ACTGGGCGTA CCCTACTACC TGATCCGCGC CACGGTGCTA GGGGTCATGG CCCAACGCCT GGTGCGCACG CTCTGCCCGC ACTGCAAGGC GCCGATGCAA CTGGCGGACA GCGACTGGCA CGAACTGACC CGCCCCTGGA GCGCCCCGCC GCCCAGCGGC GCGCACCAGG CCGTGGGTTG CCTGGAGTGC CGCGACACCG GCTATCGCGG GCGCGCCGGC GTCTATGAAA TCATGCTGCT CAGCGATAGC CTGAAAGAAC TGATCACCGC CGACACCGAC CTGGTCGCCC TGCGCCGCCA GGCGTACAAA GAAGGCACCC GCAGCCTGCG CCTGTCCGGC GCGCAGAAGG TCGCCGCGGG TATCAGTACG CTGGAGGAAG TACTGCGGGT GACCCCGCAG AGCGAACAGA AGTAG
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Protein sequence | MSVFATAAQD RLLDLGDLLR ELVAQGRVGQ EQAEQCLAIR RSAVRNQQHP LEFLAAQQVE DLKRPGRKLD LETLTQWLAE YAGQPYLRID PLKIDVAAVT PLMSYAFAQR HGILAVALSP EEVTIASAQP FVQGWESNLV HVLKRPIKRV VANPADIQRY TVEFFRLARS VSGATSPDQK ISGVGNFEQL LNLGAADQEP DANDAHIVTI VDWLFQYAFQ QRASDIHIEP RREQGTVRFR IDGVLHNVYQ FPPQVTMAVV SRLKSLGRMN VAEKRKPQDG RVKTKTPDGA EVELRLSTLP TAFGEKMVMR IFDPEVLLKS FDQLGFSADD LRRWQSMTSQ PNGIILVTGP TGSGKTTTLY TTLKQLATDE VNVCTIEDPI EMIEPSFNQM QVQHNIDLTF ASGVRALLRQ DPDIIMVGEI RDLETAEMAI QAALTGHLVL STLHTNDSPT AITRLLELGV PYYLIRATVL GVMAQRLVRT LCPHCKAPMQ LADSDWHELT RPWSAPPPSG AHQAVGCLEC RDTGYRGRAG VYEIMLLSDS LKELITADTD LVALRRQAYK EGTRSLRLSG AQKVAAGIST LEEVLRVTPQ SEQK
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