Gene PA14_68390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_68390 
Symbol 
ID4384398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6101809 
End bp6102474 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content66% 
IMG OID639328114 
Productputative hydrolase 
Protein accessionYP_793648 
Protein GI116053324 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.024723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.554415 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC TGCCCTGGTC CGCCATCGAC ACCGTGCTGC TCGACATGGA CGGCACCCTG 
CTCGACCTGC ACTTCGACAA CCACTTCTGG CTGGAACACC TGCCCCAGCG CTATGCCGAA
CGCAACGGCC TGAGTCGCGC CGAAGCCGAT GCCGTGCTCG AGCCGCTGTT CCGCGAACAC
GCTGGCCAGC TCAACTGGTA CTGCCTGGAT TTCTGGAGCC GGGAATTGGA CCTGTCGATC
CGCGAACTCA AGCATGAGGT GGCGCACCTG ATCTCGCTGC GTCCGCACGC CGATACCTTC
CTCGCCGCCC TGCGCCAGGC CGGCAAGCGC GTGGCGCTGA TCACCAACGC GCACCGCGAC
TCGCTGTCGC TGAAGCTGGA ACGGATCGAA CTGGCGCCCT ATTTCGACCG ACTGATCAGC
TCCCACGACT ACGGCTACCC GAAGGAGGAC GCGCGCTTCT GGAGCGCCCT GCAAGCCGAT
TTCGGCTTCG ACCCGCAGCG CAGCCTGTTC ATCGACGACA GCCTGCCGAT CCTGCGCAGC
GCCCGCGCCT ATGGTGTCGC CCACCTGTTG GCGGTACGCC ACCCGGACAG CCGTGGCCAG
GTCCGGGACA CCGAGGAGTT CGCTGCCCAG GAGGACTACC GGCGGCTGCT CGAAGGACTG
CCGTAG
 
Protein sequence
MPTLPWSAID TVLLDMDGTL LDLHFDNHFW LEHLPQRYAE RNGLSRAEAD AVLEPLFREH 
AGQLNWYCLD FWSRELDLSI RELKHEVAHL ISLRPHADTF LAALRQAGKR VALITNAHRD
SLSLKLERIE LAPYFDRLIS SHDYGYPKED ARFWSALQAD FGFDPQRSLF IDDSLPILRS
ARAYGVAHLL AVRHPDSRGQ VRDTEEFAAQ EDYRRLLEGL P