Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_68390 |
Symbol | |
ID | 4384398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6101809 |
End bp | 6102474 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639328114 |
Product | putative hydrolase |
Protein accession | YP_793648 |
Protein GI | 116053324 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.024723 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.554415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCC TGCCCTGGTC CGCCATCGAC ACCGTGCTGC TCGACATGGA CGGCACCCTG CTCGACCTGC ACTTCGACAA CCACTTCTGG CTGGAACACC TGCCCCAGCG CTATGCCGAA CGCAACGGCC TGAGTCGCGC CGAAGCCGAT GCCGTGCTCG AGCCGCTGTT CCGCGAACAC GCTGGCCAGC TCAACTGGTA CTGCCTGGAT TTCTGGAGCC GGGAATTGGA CCTGTCGATC CGCGAACTCA AGCATGAGGT GGCGCACCTG ATCTCGCTGC GTCCGCACGC CGATACCTTC CTCGCCGCCC TGCGCCAGGC CGGCAAGCGC GTGGCGCTGA TCACCAACGC GCACCGCGAC TCGCTGTCGC TGAAGCTGGA ACGGATCGAA CTGGCGCCCT ATTTCGACCG ACTGATCAGC TCCCACGACT ACGGCTACCC GAAGGAGGAC GCGCGCTTCT GGAGCGCCCT GCAAGCCGAT TTCGGCTTCG ACCCGCAGCG CAGCCTGTTC ATCGACGACA GCCTGCCGAT CCTGCGCAGC GCCCGCGCCT ATGGTGTCGC CCACCTGTTG GCGGTACGCC ACCCGGACAG CCGTGGCCAG GTCCGGGACA CCGAGGAGTT CGCTGCCCAG GAGGACTACC GGCGGCTGCT CGAAGGACTG CCGTAG
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Protein sequence | MPTLPWSAID TVLLDMDGTL LDLHFDNHFW LEHLPQRYAE RNGLSRAEAD AVLEPLFREH AGQLNWYCLD FWSRELDLSI RELKHEVAHL ISLRPHADTF LAALRQAGKR VALITNAHRD SLSLKLERIE LAPYFDRLIS SHDYGYPKED ARFWSALQAD FGFDPQRSLF IDDSLPILRS ARAYGVAHLL AVRHPDSRGQ VRDTEEFAAQ EDYRRLLEGL P
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