| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_68140 |
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| Symbol | |
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| ID | 4383474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 6080538 |
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| End bp | 6082067 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639328096 |
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| Product | drug efflux transporter |
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| Protein accession | YP_793631 |
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| Protein GI | 116053307 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000279343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00567017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGAAA GCAGCAGCTT CTCCCCGCCC AGCCTGGTGA TGGCGACCAT CGGCCTGTCC
CTGGCGACTT TCATGCAGGT GCTCGATACC ACCATCGCCA ACGTCGCCCT GCCGACCATC
TCCGGTAACC TCGGGGTGAG TTCGGAACAG GGCACCTGGG TGATCACCTC GTTCGCCGTG
AGCAACGCCA TCGCCCTGCC GCTGACCGGC TGGCTGGCCC GGCGGGTCGG CGAGGTGCGC
CTGTTCATCG CCGCCGCGCT GCTGTTCGTA CTCGCCTCGT TCCTCTGCGG CATCGCCCAG
TCGATGCCTT CTCTGGTCGG CTTCCGCGCC TTGCAGGGCT TCGTCGCCGG GCCGCTGTAT
CCGATCACCC AGACCCTGCT GATCTCCATC TACCCACCGG CGAAGCGCGG CATGGCCCTG
GCCCTGCTGG CGATGGTCAC GGTGGTGGCG CCGATCGCCG GGCCGATCCT CGGCGGCTGG
ATCACCGACG ACTACAGCTG GCCGTGGATC TTCTTCATCA ACGTGCCGGT CGGCCTGTTC
GCCGCTTTCG TCGTCTACCA GCAACTGAAG GCACGCCCGG TGGTGATCAA GAAGGCGCCG
ATGGACTACG TCGGCCTGAT CGCCCTGGTG ATCGGCGTCG GCGCCCTGCA GATCGTCCTC
GACAAGGGCA ACGACCTGGA CTGGTTCGAG TCGAACTTCA TCGTCGGCGG CGCGCTGATC
GCGGCGATCG CCCTGGCCTT CTTCATCATC TGGGAATTCA CCGACCGCCA TCCGATCGTC
AACCTGCGCC TGTTCGCCCA CCGCAACTTC GCCGCCGGCA CCCTGGCGCT GGTGCTGGGC
TATGCCGCAT TCTTCGGCAT CAACCTGCTG CTCCCGCAAT GGCTACAGAC CCAGATGGGC
TACACCGCCA CCTGGGCCGG GCTGGCCGCC GCGCCAATCG GCATCCTCCC GGTGTTCCTC
TCGCCGCTGG TCGGCCGCTA CGCCAACCAT TTCGACCTGC GCATACTCGC CGGCCTGTCG
TTCCTGGCGA TGGCCATCAC CTGCTTCATG CGCGCCAACT TCACCACCGA GGTCGACTAC
CAGCACATCG CCATCGTGCA GTTGATCATG GGGCTCGGCG TGGCGTTCTT CTTCATGCCG
ATCCTGAGCA TCCTGCTCTC CGACCTGCCC CCCGACCAGA TCGCCGACGG CTCCGGACTG
GCCACCTTCC TGCGCACCCT CGGCGGCAGC TTCGCCGCCT CGCTGACCAC CTGGATCTGG
AACCGCCGCG CCACCCAGCA CCACGCCTAC CTCAGCGAAA ACATCAGCCT CTACGACCCG
GCCACCCACG AAACCCTCGC CCAGCTCGGC GGCAACACCC AGGCGAACGC GGCGCTGCTC
GACCGGATGG TGCAGAGCCA GGCCTACATG ATGTCCACCA TCGACTACTT CACCATGCTC
GGCTGGCTGT TCCTCGCCCT GCTGGTGATC ATCTGGCTGG CCCGCCCGCC GTTCGGCGCC
AAGCCCGGCG CGGCCGCCTC CGGGCACTGA
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| Protein sequence | MSESSSFSPP SLVMATIGLS LATFMQVLDT TIANVALPTI SGNLGVSSEQ GTWVITSFAV
SNAIALPLTG WLARRVGEVR LFIAAALLFV LASFLCGIAQ SMPSLVGFRA LQGFVAGPLY
PITQTLLISI YPPAKRGMAL ALLAMVTVVA PIAGPILGGW ITDDYSWPWI FFINVPVGLF
AAFVVYQQLK ARPVVIKKAP MDYVGLIALV IGVGALQIVL DKGNDLDWFE SNFIVGGALI
AAIALAFFII WEFTDRHPIV NLRLFAHRNF AAGTLALVLG YAAFFGINLL LPQWLQTQMG
YTATWAGLAA APIGILPVFL SPLVGRYANH FDLRILAGLS FLAMAITCFM RANFTTEVDY
QHIAIVQLIM GLGVAFFFMP ILSILLSDLP PDQIADGSGL ATFLRTLGGS FAASLTTWIW
NRRATQHHAY LSENISLYDP ATHETLAQLG GNTQANAALL DRMVQSQAYM MSTIDYFTML
GWLFLALLVI IWLARPPFGA KPGAAASGH
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