Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_67975 |
Symbol | |
ID | 4384257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 6065872 |
End bp | 6068124 |
Gene Length | 2253 bp |
Protein Length | 750 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639328082 |
Product | hypothetical protein |
Protein accession | YP_793618 |
Protein GI | 116054460 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.302933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.0556453 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCAT TCGGCAAGGT CCTGGGGCTG TTCTTCCTGG GACTCTTACT GCTCGTCGTG GCCCTGGGCT TCGCCCTGAC CCACCTGTTC GATCCCAATG ACTACAAGGA CGAAATCCGC CAGATCGCCC GCGACAAGGC CAACCTGGAG CTGGACCTGA AGGGCGACAT CGGCTGGAGC CTGTTCCCCT GGCTGGGCCT GGAGCTGCAC GACACCAGCA TCGCCAGTAC CGCCACGCCG ACCAAGCCGT TCGCCGACCT GCAGATGCTC GGCCTGTCGG TGCGGGTCCT GCCGCTGCTG CGCAAGGACG TGCAGATGAG CGCGATCCGC GTCGAAGGCC TGAGCCTGGA CCTGGTCCGC GACAAGCAGG GCAAGGGCAA CTGGGAAAAC ATCGGCAAGC CGGCCCAGCC CCAGGCCCCG TCCGCTCCTT CCGCCACCCC GCCGGCAGCG GACGGCAAGG GCGCCCAGGC GCAGGCACCC GAGCAGGCGC CGCAGAACGA CAGCCCGCGC ACCCCGATCA AGCTCGACAT CGACAGCCTC AACGTCAACA ACGCCCGCGT CACCTACACC GACGAAGCCA GCGGCAAGCA GTACAACGTC GAGGGCATCG AGCTGAGTAC CGGCGCCATT CGCGAAGGCA GCAGCATTCC GCTGAAGCTC AACGCCTACC TCGGCACCAA CCAGCCGGTG GTGCGGGTCA AGACCGAGCT GACCGGCAAC CTGCGCTTCG ACACCGCGCT CAGGCGCTAC CAGTTGGAAG ACGCCAGGCT CTCCGGCGAG GCCTCGGGCG AGCCGCTGCA AGGCAAGACC GCCACCTTCT CCGCCCAGGG CCAGTTGCTG CTCGACCAGT CGGCGCAGAT CGCCGAGTGG AACGGTCTGA AGCTGAGCGT CAACCAGTTG CGCGCCCTCG GCGAACTGAA GGCCCGCGAG CTGGACAAGG ACGCCAAGTT CAGCGGCGGC CTGTCGATCG CGCCGATGAA CCTGCGCGAG TTCCTCGCCG GCATCGGTGT GACCCTGCCG GCCATGGCCG ACGCCAACAC CCTCGGCAAG TTCGAGCTGA ACACCCGCCT GGCCGGCAGC CGCAACAGCC TGAATCTCGA AGACCTCAAG CTGGGCCTGG ACGACACCGC CTTCAGCGGC CGCTTCGGCA TCGCCGATTT CGCCAGGCAA TCGCTGCGCG CCCAGCTCAA GGGCGACAAG CTCGACCTCG ACCGCTACCT GCCGGCCAAG GCCAAGCAGG CCCAGGATGC CGCCAGCGCC ACGCGCAAGG CGGAAGTCGA CGCCACCGTG GCCAGTGCCG CCCAGGGCAA CACGCCGCTA CCGGAAAAAC CGACCAGGCA GGCCTGGAGC GACGCGCCGT TGCTGCCCAT GGCGACCCTG CGCAAGCTCG ACCTGGACGT GGCGCTGAGC TTCGGTCGGC TGACCGTCGA GAAGCTGCCA ATCGACGACG CCAGCCTGAA GCTGCGTGGC CAGGGCGGCG TGATCAGCCT CGACGACATG CGCGGCGGGC TGTACAACGG CCGCTTCAAC GCCAAGGCCA ACCTCGACGT ACGCCAGGAC AGCGCCGTGT TGACCGCCAC CAAGCACATC GCCAACGTGC CGGTGGAGCG CCTGCTCGAA GCCCAGGGCA AGAAACCGCC GGTGAAGGGG CTGCTCGACC TCGACGCCGA CATCCGCACC AGCGGCAACA GCGAGAAGTC CTGGATCGAC CATCTCAACG GCAGCGCACG CTTCAGCCTG ATCAACGGCG TGCTGCTCGA CGCCAACCTG GAGCAACAGC TCTGCCAGGG CATCGCTACC CTCAACCGCA AGGCCCTTGC CGGTACCCAC GGCGGCAAGG ACACGCCTTT CCGCGAGCTC AAGGGCAGCC TGAACTTCAC CAACGGCGTG GCCAGCAACC CTGACCTGAA GGTCGCCATC CCCGGCCTGG CGGTCAGCGG CCACGGCGAT ATCGACCTGC GCGTGCTGGG CATGGACTAT CGCATCGGCG TGGAGATCCA GGGCGACAAG AGCGACATGC CGGACCCGGC CTGCCAGGTC AACCAGCGCT ACGCCGGCAT CGAATGGCCT CTGCTCTGCC GCGGCCCGCT GGAACTCGGC GCCAAGGCCT GCCGCCTGGA CAAGGAAGGC CTGGGCAAGG TCGCCGCGAA ACTGGCCGGC AATCGCCTCA ACGAAAAACT CGAAGAGAAG CTCGGCGACA AGGTCAGTCC GGAGCTGAAA GACGCACTCA AAGGGCTGTT CAACCGCAAA TGA
|
Protein sequence | MKAFGKVLGL FFLGLLLLVV ALGFALTHLF DPNDYKDEIR QIARDKANLE LDLKGDIGWS LFPWLGLELH DTSIASTATP TKPFADLQML GLSVRVLPLL RKDVQMSAIR VEGLSLDLVR DKQGKGNWEN IGKPAQPQAP SAPSATPPAA DGKGAQAQAP EQAPQNDSPR TPIKLDIDSL NVNNARVTYT DEASGKQYNV EGIELSTGAI REGSSIPLKL NAYLGTNQPV VRVKTELTGN LRFDTALRRY QLEDARLSGE ASGEPLQGKT ATFSAQGQLL LDQSAQIAEW NGLKLSVNQL RALGELKARE LDKDAKFSGG LSIAPMNLRE FLAGIGVTLP AMADANTLGK FELNTRLAGS RNSLNLEDLK LGLDDTAFSG RFGIADFARQ SLRAQLKGDK LDLDRYLPAK AKQAQDAASA TRKAEVDATV ASAAQGNTPL PEKPTRQAWS DAPLLPMATL RKLDLDVALS FGRLTVEKLP IDDASLKLRG QGGVISLDDM RGGLYNGRFN AKANLDVRQD SAVLTATKHI ANVPVERLLE AQGKKPPVKG LLDLDADIRT SGNSEKSWID HLNGSARFSL INGVLLDANL EQQLCQGIAT LNRKALAGTH GGKDTPFREL KGSLNFTNGV ASNPDLKVAI PGLAVSGHGD IDLRVLGMDY RIGVEIQGDK SDMPDPACQV NQRYAGIEWP LLCRGPLELG AKACRLDKEG LGKVAAKLAG NRLNEKLEEK LGDKVSPELK DALKGLFNRK
|
| |