Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_64820 |
Symbol | |
ID | 4384829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5776477 |
End bp | 5777190 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327836 |
Product | putative transcriptional regulator |
Protein accession | YP_793374 |
Protein GI | 116053055 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00305784 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAC CGGGCCAACG CGTGCTGGCC GAGCTGCGCA AGCTGATCGC TTCCGGCGAA CTCGCCGCCG GCGAGCGCAT CGTCGAGATT CCCACCGCCG AACGCCTGCA GGTCTCGCGC ATGCCGGTGC GCATCGCCCT GCGTACCCTC GAGCAGGAAG GCCTGCTGTG CAAGACCGGG CGCGGCTACA GGGTGCGCGC GGTGACCCGC GAGGATATCG CCGGCGCGGT CGAGGTGCGC GGCGTTCTGG AAGGCCTGGC GGCACGCCAG GCGGCCGAGC GCGGGCTGTC CGCCGAGGCA CGGGCGACCC TGGAGGAATG CCTGGCCGAG GGCGACCGAT TGTTCGCCAA CGGCCAGGTC CTGCTGGAGG AGCTGGAGCG CTACCAGCGC ATGAACATGC GCTTCCACCG CACCATCATC GAGGCCAGCG GCAACCCGGC GATCGCCGTG GCGCTGGCGC GCAACGACCA CCTGCCGTTC GCCTCGGTGA GCGCCCTGGC GGTGGATCGC GACAATCTCG AGCAGGAATT CCGCCGTTTC AACTTCGCCC ACATGCAGCA CCACGCGGTG GTCGACGCGC TGGTCAACGG CCAGGGGGCG CGCGCCGAGG CGATCATGCG CGAGCACGCC AACGCGACCT TGCGCTACGC CGACTACTTC GATCCGGCGC GGAAGGGCGT CACCGTGCTT CACGGCGACG TCGCCGCCGA CTAG
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Protein sequence | MSKPGQRVLA ELRKLIASGE LAAGERIVEI PTAERLQVSR MPVRIALRTL EQEGLLCKTG RGYRVRAVTR EDIAGAVEVR GVLEGLAARQ AAERGLSAEA RATLEECLAE GDRLFANGQV LLEELERYQR MNMRFHRTII EASGNPAIAV ALARNDHLPF ASVSALAVDR DNLEQEFRRF NFAHMQHHAV VDALVNGQGA RAEAIMREHA NATLRYADYF DPARKGVTVL HGDVAAD
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