Gene PA14_60120 details

Gene Information

• Locus tag: PA14_60120
• Symbol: dcd2
• ID: 4384536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas aeruginosa UCBPP-PA14
• Kingdom: Bacteria
• Replicon accession: NC_008463
• Strand: -
• Start bp: 5354756
• End bp: 5355289
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 639327448
• Product: putative deoxycytidine deaminase
• Protein accession: YP_793000
• Protein GI: 116052684
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0717] Deoxycytidine deaminase
• TIGRFAM ID: [TIGR02274] deoxycytidine triphosphate deaminase

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000000000000424193
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0000000073225
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGATTTACT CACCGCACTC GCTCCTGAAA CTGGTCCGGG ATGGAAAACT AATCAAGCAC 
CTTGCCCACC GTGAGTTGAC CACCCCGGAA GGCGTTGGAT TTGACCTCAG ACTCGCAGGC 
CTCTCTCGCC TGACAGTAGG GGGTGGAAGC TTGCGAGAAT CTACGCGACG CACCCCTGCC 
AGCGAGGTCG TGCTCGCAGA CCCGGATGAC TGCTTCGTCA TGGAACCGGG CAAGACTTAT 
CTGGCGAGCA CCATGGAAGA ATTCGATCTG CCGGAAGATC TGGCGGCGCT TTTTTTTCCG 
AGAAGCACGC TGTTCAGAAG CGGGATAACG TTCAGTTCCA GTGTGCTGCC TCCAGGTTAT 
GTAGGGCCGA TGACGTTCGC GCTCACCAAC AATCACAGCG AGGCGTTTGA AATTCAGATT 
GGTGCACGCT TTGCGCACGT CATCTTTCAG GCGGTATCCG GGGATATCGG CCGGTATAAA 
GGACAATGGC AGGGTGGCCG CGTCTCGCAG CCCAAGGACG AAGGACAAAT CTGA 

 

Protein sequence

MIYSPHSLLK LVRDGKLIKH LAHRELTTPE GVGFDLRLAG LSRLTVGGGS LRESTRRTPA 
SEVVLADPDD CFVMEPGKTY LASTMEEFDL PEDLAALFFP RSTLFRSGIT FSSSVLPPGY 
VGPMTFALTN NHSEAFEIQI GARFAHVIFQ AVSGDIGRYK GQWQGGRVSQ PKDEGQI