Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_56470 |
Symbol | |
ID | 4382428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 5035463 |
End bp | 5036782 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639327135 |
Product | putative MFS transporter |
Protein accession | YP_792688 |
Protein GI | 116052377 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTT GCCCGAGCGG TACCTCGCGT ACCCGCCAGG TGGCGGCTGC CGTGATCGGC AACGCCCTGG AGTGGTACGA CTTCATCGTC TACGGCTTCC TTTCCAGCCT GATCGCCAGG CTGTTCTTCC CTTCCGGCGA CGAGTACACC TCGCTGTTGA TGGCCCTGGC CACCTTCGGT GTCGGTTTCT TCATGCGTCC GGTCGGTGGG GTCCTGCTCG GCCTGTATGC CGACCGCAGG GGACGCAAGG CGGCGATGCA ACTGATCATC CTGCTGATGA CGCTGTCCAT CGCGATGATC GCCTTCGCCC CGACCTACGC GGCGATCGGC GTCGGCGCAC CGTTGCTGAT CGTGATCGCG CGAATGCTGC AGGGTTTCGC CACCGGCGGC GAGTACGCCA GCGCCACGGC TTTCCTGGTG GAAAGCGCGC CACCGCACCG GCGCGGTCTC TACGGTTCCT GGCAATTGTT CGGCCAGTGC CTGGCGGTGT TCGCCGGTGC GGGGATGGGC GCGCTGGTCA CCCATTGCCT GGACGCCGAG GCCCTGGAGA GCTGGGGCTG GCGGGTGCCG TTCCTGTTCG GTCTGCTGAT CGGTCCGGTG GGATTGTGGA TCCGCCGCTA CATGGGCGAG ACCGAGGCCT TCCTCGAAGC CATCCGGGAG CCCGGCGAGC GCCAGGGGCT GCTCGGCGTG CTGCGCGAAT ACCGGCGCAG CGTGCTGGTG AGCATGGGCC TGACGGTGAT CGGCACGGTG TCCTTCTACG TGGTGCTGGT GAATATGCCG ACCTTCGCCC ACAAGCAGTT GGGCCTGCCG CTGGACGAGG TGTTCATGGT GCAGATGGCT GCGGTGGCGC TGATGACCCT GGTAATCCCG TTGGCTGGGG GACTCTCCGA CCGGGTCGGG CGGCGCCCGG TGCTGTTGGT CGCGACCCTG GCCTTCATGT TCATGGTCTA TCCGCTGTTC GCTTGGGTCG CCGCGGCGCC GAGCCTGGGG CGCCTGCTGC TGATGCAACT GTTGCTGTGC ACGGCGATCG GCGGCTTCTT CGGCCCGGCG CCGACCGCGG TGGCCGAGCA GTTTCCGGTG CGGGTGCGTT CCACCGGCCT GGCGGTGGCG TATAACCTGG CGGTGATGCT GTTCGGCGGT TTCGCTCCGT TCATCGTCAC CTGGCTCACC GAGGTCGGCG GCTCGCCAGT GGCGCCGGCG TTCTACGTGC TCGGCGCGGC CTTCCTCGGG CTGCTCGCCA CCCTCTATCT GCGGGAGGGC GCGACGCCCG CCCCGCGCCC CCGTGAACCG GCCCTGGGCA AGCCGGCAAG GAGTCTGTGA
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Protein sequence | MHACPSGTSR TRQVAAAVIG NALEWYDFIV YGFLSSLIAR LFFPSGDEYT SLLMALATFG VGFFMRPVGG VLLGLYADRR GRKAAMQLII LLMTLSIAMI AFAPTYAAIG VGAPLLIVIA RMLQGFATGG EYASATAFLV ESAPPHRRGL YGSWQLFGQC LAVFAGAGMG ALVTHCLDAE ALESWGWRVP FLFGLLIGPV GLWIRRYMGE TEAFLEAIRE PGERQGLLGV LREYRRSVLV SMGLTVIGTV SFYVVLVNMP TFAHKQLGLP LDEVFMVQMA AVALMTLVIP LAGGLSDRVG RRPVLLVATL AFMFMVYPLF AWVAAAPSLG RLLLMQLLLC TAIGGFFGPA PTAVAEQFPV RVRSTGLAVA YNLAVMLFGG FAPFIVTWLT EVGGSPVAPA FYVLGAAFLG LLATLYLREG ATPAPRPREP ALGKPARSL
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