Gene PA14_55880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55880 
Symbol 
ID4382580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4988487 
End bp4989371 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content69% 
IMG OID639327093 
Producthypothetical protein 
Protein accessionYP_792646 
Protein GI116052335 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4965] Flp pilus assembly protein TadB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGGCG CGCAACTGCT GGTGCTGTTC AGCGGCGTGC TGGCTTTCGC CGCGCTGGCC 
CTGGCGTTCA TGGGCTGGCG CGCCGGGCGC AACGAACTGG TGGTTGAACG GCTGCTGGGA
CGCCAGGAGG CGGTCGCGGT GCGGCCGCGC AGCAGTCACT GGCTGGCTCG CCAGATGCGT
CGCGCCGGTA TCCAGCGCCC GCGCCCGTGG TTGTTCGGGG CGGCAGTGCT CGCGCTGCTG
CTGGTCTGGA GCGGATTGCG CCTGTTCGGC ATCGTCGGTG CGCTAGGCGG CCTGCTACTG
GCGGCGCTGT CCTGCCGCGT CGCCCTGGGC ATGCTCTACC AGCGCCGCCT GAAGCGAATG
ATCCGGCAGA TGCCGCGCTT CCTCGACCAG GTGGTGCGCA GCCTGCACGC CGGGCGCACG
CTGGGCGACG CGCTGATGCA GGCGGTGGAG AACGCCGAGG AGCCGCTGCG CGACATCTTC
ACCCTGGCAC GCAACCACGT GCTTCTCGGC ATCCACCTGC CGGAGGCGTT GCAGGAAGTC
GCCGAACTCT ACGAGGTGGA GGAACTGCGC ATCCTCGCCC TGGGCGTTTC GGTCAACCAC
CGTTATGGCG GCAATACCAG CGACCTGCTG GACAGCATCG TCAAGCTCAT CCACGAGCGC
GAGAAGCTCA GCCGGCAGTT GCACGCGATG ACCGGCGAGA CACGGATCAG CGCCTATGTC
CTGGCCGGCG TGCCGAGCGC CCTGGGCGGC TACATCCTGG CGAGCAACCC GGGCTATCTG
CTGAACATGT GGGCCGACGG CACCGGGCGT TTCCTGCTGC TGGCCTCGCT CGGGCTGCAA
CTGCTCGGCT GCTATGCGCT GTGGCGCATG CTCAAGAGCG TCTAG
 
Protein sequence
MNGAQLLVLF SGVLAFAALA LAFMGWRAGR NELVVERLLG RQEAVAVRPR SSHWLARQMR 
RAGIQRPRPW LFGAAVLALL LVWSGLRLFG IVGALGGLLL AALSCRVALG MLYQRRLKRM
IRQMPRFLDQ VVRSLHAGRT LGDALMQAVE NAEEPLRDIF TLARNHVLLG IHLPEALQEV
AELYEVEELR ILALGVSVNH RYGGNTSDLL DSIVKLIHER EKLSRQLHAM TGETRISAYV
LAGVPSALGG YILASNPGYL LNMWADGTGR FLLLASLGLQ LLGCYALWRM LKSV