Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_55880 |
Symbol | |
ID | 4382580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4988487 |
End bp | 4989371 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639327093 |
Product | hypothetical protein |
Protein accession | YP_792646 |
Protein GI | 116052335 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACGGCG CGCAACTGCT GGTGCTGTTC AGCGGCGTGC TGGCTTTCGC CGCGCTGGCC CTGGCGTTCA TGGGCTGGCG CGCCGGGCGC AACGAACTGG TGGTTGAACG GCTGCTGGGA CGCCAGGAGG CGGTCGCGGT GCGGCCGCGC AGCAGTCACT GGCTGGCTCG CCAGATGCGT CGCGCCGGTA TCCAGCGCCC GCGCCCGTGG TTGTTCGGGG CGGCAGTGCT CGCGCTGCTG CTGGTCTGGA GCGGATTGCG CCTGTTCGGC ATCGTCGGTG CGCTAGGCGG CCTGCTACTG GCGGCGCTGT CCTGCCGCGT CGCCCTGGGC ATGCTCTACC AGCGCCGCCT GAAGCGAATG ATCCGGCAGA TGCCGCGCTT CCTCGACCAG GTGGTGCGCA GCCTGCACGC CGGGCGCACG CTGGGCGACG CGCTGATGCA GGCGGTGGAG AACGCCGAGG AGCCGCTGCG CGACATCTTC ACCCTGGCAC GCAACCACGT GCTTCTCGGC ATCCACCTGC CGGAGGCGTT GCAGGAAGTC GCCGAACTCT ACGAGGTGGA GGAACTGCGC ATCCTCGCCC TGGGCGTTTC GGTCAACCAC CGTTATGGCG GCAATACCAG CGACCTGCTG GACAGCATCG TCAAGCTCAT CCACGAGCGC GAGAAGCTCA GCCGGCAGTT GCACGCGATG ACCGGCGAGA CACGGATCAG CGCCTATGTC CTGGCCGGCG TGCCGAGCGC CCTGGGCGGC TACATCCTGG CGAGCAACCC GGGCTATCTG CTGAACATGT GGGCCGACGG CACCGGGCGT TTCCTGCTGC TGGCCTCGCT CGGGCTGCAA CTGCTCGGCT GCTATGCGCT GTGGCGCATG CTCAAGAGCG TCTAG
|
Protein sequence | MNGAQLLVLF SGVLAFAALA LAFMGWRAGR NELVVERLLG RQEAVAVRPR SSHWLARQMR RAGIQRPRPW LFGAAVLALL LVWSGLRLFG IVGALGGLLL AALSCRVALG MLYQRRLKRM IRQMPRFLDQ VVRSLHAGRT LGDALMQAVE NAEEPLRDIF TLARNHVLLG IHLPEALQEV AELYEVEELR ILALGVSVNH RYGGNTSDLL DSIVKLIHER EKLSRQLHAM TGETRISAYV LAGVPSALGG YILASNPGYL LNMWADGTGR FLLLASLGLQ LLGCYALWRM LKSV
|
| |