Gene PA14_55080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55080 
Symbol 
ID4384888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4893060 
End bp4894265 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content61% 
IMG OID639327021 
Producthypothetical protein 
Protein accessionYP_792579 
Protein GI116048621 
COG category[L] Replication, recombination and repair 
COG ID[COG1570] Exonuclease VII, large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000768614 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.46847e-21 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCGAAGG ACCTCAACGG CCTGGCGCGG TCGTTTGCCA CAAACGTTTG TACGTTCCCT 
CTCCAATGCT TGAGTCGGCG GCAAGCCAGC GCCAGCCTCA GTTCAATACG ATGGGTGGAC
ATTGTGATGA ATTCAGCCAA TGGAATCGAC ATACCCGCCT CTCCAGCCGG CGAGCTGGCA
CTGACCCCCG AGGCGCTCGC CGAGACACTG AGGGTTAATG CGCCCAGTGG TCCTGTCACC
GTCAAAGGCA TGGCCACCGA TGTGAAGTAC TGGTCGAGGA ATGGGGACGA CAAGGTTCTC
AAGATATATG GCCGCCTGGT ACTGGGGGAT GCCAGTATCC GCTTCGAATT GCAGCCCCAC
GCTGCTGTCC GCAATGATGC TCCCGTCGTT CTCCATGGCT CACTGCGCAT CAAGAAGTCG
GAGACATTCC GCACGACCCA CGAAGTCATC CTGGTGGGTG ATGTCGTCGG TAGCTGGGTA
CCCTATGAGC CGGTCCCCCT TGTGTCACCC GCCCCCCTGG TACGCCAGCA ACCGCGGGTG
TCCCTGGAGG CGGCACTCGC CAAACACGGA CTGGAAGCCA TCGCTATACT CGCCACCGGC
ACGGCCTGGA ACGACCTGGC GGCAGCGGCA CAATCGCTCC CCGTCTTCTC CCACTGTCGC
AGGGTAGAGA CGAATTTCAT GGAGCCCGAG CAGTTCCTAA GCGACCTGGC CAAGGTATGC
CAAGACCCCG CCATTCAAGT GCTGGTGATT GCTAGAGGCG GCGGTGATAG CCTGGAAGTC
ATCGGAGATT CACGGGAGGT GGCCTGTGCG CTATTGGCCT GCGGGCGCCC GTTCTATACG
GCTCTGGGGC ACGACGACAA TGTGATGTTG CTGGACAAGC ATGCGGACCG GTCGTTCTCC
ACACCGTCCA TCCTGGGGCA GGCACTGATG GAGACCGCCC GCGACATCAC ACAACGGCAG
GAGCTGCAGG AGAGCCTGGG CAAATTCGCC CAGGAAAACG CATCGCTGAA AGAACAACTG
CTCCAGGCGA ACGCCCGCCT GGAGCAGAAC CTGGCCAAGG AGCCGTCGGC CATTCATGAG
GCGGACAGCC AAAAAGGAAT CGTCGCGCAA GTCCCTGTAC CAGCGCCCAC CCCTGAAATG
CGCAGGTACG TCATATGGGC GATTGCGCTT CTGGTGGTCT TTGCCATCGG CCGTTGCTCG
ACGTGA
 
Protein sequence
MAKDLNGLAR SFATNVCTFP LQCLSRRQAS ASLSSIRWVD IVMNSANGID IPASPAGELA 
LTPEALAETL RVNAPSGPVT VKGMATDVKY WSRNGDDKVL KIYGRLVLGD ASIRFELQPH
AAVRNDAPVV LHGSLRIKKS ETFRTTHEVI LVGDVVGSWV PYEPVPLVSP APLVRQQPRV
SLEAALAKHG LEAIAILATG TAWNDLAAAA QSLPVFSHCR RVETNFMEPE QFLSDLAKVC
QDPAIQVLVI ARGGGDSLEV IGDSREVACA LLACGRPFYT ALGHDDNVML LDKHADRSFS
TPSILGQALM ETARDITQRQ ELQESLGKFA QENASLKEQL LQANARLEQN LAKEPSAIHE
ADSQKGIVAQ VPVPAPTPEM RRYVIWAIAL LVVFAIGRCS T