Gene PA14_55020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_55020 
Symbol 
ID4384894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4885877 
End bp4886899 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID639327015 
ProductABC transporter permease 
Protein accessionYP_792573 
Protein GI116048627 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000520713 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.14331e-21 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGACGAGT GCGCAATTGA TGCGCGGTCC CGCCTCTCTT CTCGGTTGCG GTCGCTCTGG 
ATCGCTGGCC TCAGCCTGTT GGCCATCGGC GCGATAGTGG TCGGGACCTT GGCACTGGGT
GACTTCGGGA TTCCGTTTGG CCGGGTGTTG CAGGTTCTCG TCCAAGACGA CGGCTCCGAC
GCAGCCTTCG TGATCCACGA GATTCGCCTC CCCCGGCTGT TGACCGCGAC ACTGGTTGGG
GCCGCCCTGG GACTGGCCGG AGCCATCGTG CAGGCGATCA CCCGCAACCC CCTGGGCGAG
CCCGGGCTGC TCGGCGTCAC CGCCGGAGCT GCGTTTGCCA TGGCCCTGTG CATGACCTAC
CTCAGTCTGC CCACGTCCGC CGAACTCGCT GCGAGCACCG TCGGTGGAAT CGCCGCGGCG
ACACTCACGC TTGCCATCGG TATGGGAGCC CGGCTGGATC CGTTGTACCT GACGCTGACC
GGCATGAGCA TCAACCTGTT CTTTGCCGCT GCCATCATCG TGATGCTGGT GTCCGCGAAC
GTAGAGGTCA ACGGTATCTA TTACTGGCTG ACCGGCAGCC TGATCAACCG GACCTGGGAG
CATGTCGCGA TGCTCTGGCC ATGGGTCGTG TCAGGTTTAG TCTTGGGTCT TGCGTGCGCT
GGGCGACTGG ACACGATGAT CCTCGACGAA GATGTGCTCA CTGCGCTGGG CATGCGCGTG
ACAGCTTGGC GCCTTTTGTT CGGCCTCGTG GTGGTGCTGC TCTCAGCTTC GGCCGTGGCT
GCCGCGGGTC CAATCACCTT CATTGGCCTG GTCGCACCAC ACATCGTCCG CTTCGGTCTG
GGTTCCAGGG GTATTCGCCA CCGGACCTTG CTACCGCTCT CGGCATTGGT GGGCGCCGGC
CTGGTGTGCG CTGCTGATTT TGCCGCCAAA TGGCAGGAGG TGCCGGCCGG CATCCTATGC
GTACTTCTGG GTGGCCCAGT GCTGGTCTAT CTGGTCGGCC GGAGGGAGAC CTCCGATGCG
TAG
 
Protein sequence
MDECAIDARS RLSSRLRSLW IAGLSLLAIG AIVVGTLALG DFGIPFGRVL QVLVQDDGSD 
AAFVIHEIRL PRLLTATLVG AALGLAGAIV QAITRNPLGE PGLLGVTAGA AFAMALCMTY
LSLPTSAELA ASTVGGIAAA TLTLAIGMGA RLDPLYLTLT GMSINLFFAA AIIVMLVSAN
VEVNGIYYWL TGSLINRTWE HVAMLWPWVV SGLVLGLACA GRLDTMILDE DVLTALGMRV
TAWRLLFGLV VVLLSASAVA AAGPITFIGL VAPHIVRFGL GSRGIRHRTL LPLSALVGAG
LVCAADFAAK WQEVPAGILC VLLGGPVLVY LVGRRETSDA