| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_54960 |
|---|
| Symbol | |
|---|
| ID | 4380487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4880090 |
|---|
| End bp | 4881058 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639327011 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792569 |
|---|
| Protein GI | 116048631 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000341506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 2.05856e-21 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | GTGAATAGCC GCTCAGCGCG AGTGGAATCT CCGCCGAGTC TTCTCCTGCT CTTAAGAAGG
TTTTGGACAA TGTGTGAACG TCAGATCTTG TCACGCGCAC TTTCCGCCAG TGCCCTGGCG
GGCATGCTGC AACTCAGTTT CCCTGCGGGC GCCGCCGCTC CTTTGAACGA TGAAGAGTCG
GTAGTTCTGG ACTCAATTAC CGTGACGGCG CGTAAGCGCG AGGAGAATCT CAACGATGTT
CCCGGGTCGG TGCACGTGGA GACTGGCCGT GACCTGGAGC GAAAACGCAT GCTCGATGGA
GCGGCGGCAT TGCGCGATGT GGCAGGTGCG AGCGTGGGCA TTTTCGGCGA TCGCTCCAAC
GCTTTCGTCG TCCTGCGCGG CGTGGCACCC ATTCTCACGC CGCTCAGTCC CGACGACAGC
TCAGTACTGA CCTTCGTGGA TGGTGCGCCG ATGCCGATTG GCGCATCGTT TTCCCCGTAT
CTGGATCTTG AGCGAATGGA GGTGATGAAG GGGCCACAGA GCACGCTCTT CGGTCGCAAC
ACCTCGGGCG GCGCGATCAA CCTTGTGCCG GTGAAGCCAA ACCATGAATT CGAAGCCTCG
GTTCGGGGCG AAGGGGGGAC CGATGGCATC TTCCGCACTG AAGCCATCAT CAACGGCTCA
CTCGTTCCGG AAACGCTATC CGCGCGCCTG GCTCTCCGGC GCTCAGGCGC CGACGGCTAC
ATCAACAACG TCGCCGGACG CGACTTGGGA GAGGAGCGGA CCTGGGCCGC GCGCGGCTCT
GTGCTGTTCA CGCCTTCCTC CCGGGTGCGA TGGCTCCTGA GTGCTCAGGG GGAGAGCACG
GATAGCGCGC CAACGGCCTA CATTGCATAC CGGCCGGGGG AGCGAAGACC GCGGCACAGA
ACAAGACGAT CGACGACATC CGGATGTACG CATTCAGCTC GCGTCTGGAG TACGACTTCG
ATGACATGA
|
|---|
| Protein sequence | MNSRSARVES PPSLLLLLRR FWTMCERQIL SRALSASALA GMLQLSFPAG AAAPLNDEES
VVLDSITVTA RKREENLNDV PGSVHVETGR DLERKRMLDG AAALRDVAGA SVGIFGDRSN
AFVVLRGVAP ILTPLSPDDS SVLTFVDGAP MPIGASFSPY LDLERMEVMK GPQSTLFGRN
TSGGAINLVP VKPNHEFEAS VRGEGGTDGI FRTEAIINGS LVPETLSARL ALRRSGADGY
INNVAGRDLG EERTWAARGS VLFTPSSRVR WLLSAQGEST DSAPTAYIAY RPGERRPRHR
TRRSTTSGCT HSARVWSTTS MT
|
|---|
| |