| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_54950 |
|---|
| Symbol | |
|---|
| ID | 4380488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 4878789 |
|---|
| End bp | 4880135 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639327010 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792568 |
|---|
| Protein GI | 116048632 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000000000722946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 3.2012599999999998e-21 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCAT TCAGCTCGCG TCTGGAGTAC GACTTCGATG ACATGACCGT CACTGCACAG
ACTAGTTATG CGCGCCTGAA CGACCAGAAC GACTACAACT TCCCGGATGC GAGGATTGCC
AGCGACTTCA GCGGCCTGCC GCCCGAGCAA TTCCTGGATC CAGCGACCAA CTTCATCGAC
TGGCGAAAAC GCGACTCTCG ACTGACACAA GAATTCAGGC TGGGATCGCT ACCGGGGGCC
GATATCGGCT GGCTTGCGGG CGTGGTGTTC TATCAGGACC GAGCGCGCCG GGACAGGACC
AGCGAGATGT GGTACTTCGG GCCTTCTGCC AGTGGCAGTA CCGACTACGA CCTGAAGACG
ACAGGTCAGG CATTGTTTGG CGAAGCCACC ATTCCCTTGA ATGAGCGCCT GCAACTCACG
GTCGGAGCGC GCGCGACACG CGAAGACAAG GATTTTCATT CGGAGTACCA CAGCAACGGA
GCAGAAGGCG CGGTGCCTTA CTTCCGTGAG TCTGGATCAG AGGACTATCG CTTCCTGACG
GGCCGTACCT CGTTGTCCTA TCGCTGGACC GACGATCTGA TGACCTATGC CAGCGTGTCG
AGGGGGTACA AAAGCGGCGG ATTCGGCCTG GGTAGCTCGT TGATGTGGAG CGGCGTGCCG
CGAGAGCCCT ACGACTCCTC GACCGTCATG AGCTATGAGC TCGGTATGCG CTCCAATTGG
CTCGACGATT CGTTGGTGGT CAATGGTGCG TTGTTCTTCA ACGATATGAG CAAGGAGCAG
ATGCAGAGCT GGGACTACGA GAACTTCACC GGAAAGAACC TGAACCTGGA TGCGCGGTCG
GCCGGCTTCG AGTTGGACGC CCGTTACCTC GCAAGCCGCA ATTGGTGGAT GGAGGTAGGC
GTGGCCTATA CATACAGTTC GCTGCGCCAC GTTTCTGCAG AGGCGGCCGC GCTCCAGGAC
GGCTTGCGAA GTGGCAACAG GCTTCCAAGC GTACCGGAAT GGACGGCAAG GACCGCGCTG
GGATATGAGG CGCTGGGTCG TGAACTTGGG TTCTCCGGAT GGCTGGCAGA GCAAAGGGTG
AACGCAATGC TCACATACAA CTTTGTCGGC AGCCGTTTCA CCGATGCTTC CAACTTCGGC
AGGCTCGCTC CGGTTCACTT GATCTCGGCG CGTCTGGGTA TCGATTGGGG CGACGGGGAG
TTCTACCTGT TCGGGGACAA CCTGCTGGAC AAGAGATACA TGACGATCAA GGACCGCTTC
GGCACCGACC CCCAGGGCCA GCCGGTCTAC GGCGTTTCCT ATGCGCGCGG TGCAACCCTC
GGGGTGGGGA TGGTGCTGCG CTTCTGA
|
|---|
| Protein sequence | MYAFSSRLEY DFDDMTVTAQ TSYARLNDQN DYNFPDARIA SDFSGLPPEQ FLDPATNFID
WRKRDSRLTQ EFRLGSLPGA DIGWLAGVVF YQDRARRDRT SEMWYFGPSA SGSTDYDLKT
TGQALFGEAT IPLNERLQLT VGARATREDK DFHSEYHSNG AEGAVPYFRE SGSEDYRFLT
GRTSLSYRWT DDLMTYASVS RGYKSGGFGL GSSLMWSGVP REPYDSSTVM SYELGMRSNW
LDDSLVVNGA LFFNDMSKEQ MQSWDYENFT GKNLNLDARS AGFELDARYL ASRNWWMEVG
VAYTYSSLRH VSAEAAALQD GLRSGNRLPS VPEWTARTAL GYEALGRELG FSGWLAEQRV
NAMLTYNFVG SRFTDASNFG RLAPVHLISA RLGIDWGDGE FYLFGDNLLD KRYMTIKDRF
GTDPQGQPVY GVSYARGATL GVGMVLRF
|
|---|
| |