Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_54610 |
Symbol | |
ID | 4385295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4840928 |
End bp | 4841839 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326978 |
Product | putative transcriptional regulator |
Protein accession | YP_792537 |
Protein GI | 116048663 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.53981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.0153543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGATTCA GACTGCCGAG TCGCGTCGCC GTGAAGCGTT CCGTACAGAC CTCCGCCTGG CCCCTGCCCA ACCAGGGGGT GCGTTTCATC ACGCCGCCCC GCCTGCGTCG CGCCCTGGCC CGCCATCCGC TCGGCCAGGC CTGCTACCCA CTGGCCCTCG GTTACTACCC GGAGGCGCAT GGCCACCACA TGCAGCGGCG CGCGCCGGAC GACCATCTGT TGATCTACTG CCGTGCCGGA CGCGGCTGGC TGGAGTGCGC CGACGAGCGC GTCGAGGTCG GCGGCGGCGA CCTGCTGGTC CTGCCCAAGG GCCTGGAACA CGCCTACGGC GCCGACCCGC AGCGGCCCTG GAGCATCTAC TGGGTACATT TCGAAGGCCT CCTGGCGGAG GACTTCCTGC GCCCGCTGGG CAGCGCTCCG CGCCTGCGCC TGGGCATGCA GCCGCGCCTG CTGGCGGAGT TCGACGCGCT GCTGGCGCTG CGCCGCCAGG GCCTCAGCCT GCCGCACTTC ATCCATGCCG CGCACCTGTT GCAGGGCCTG CTCACCTCGC TGGCGGTGCG TCCGGCGCGG GCCAGCCTGA AATCCGGGCG GGTGCTGGAC ATCGACGCGG TGCAGGCGCT GATGCGCGCG CACCTGCACG ACAGCCTCAA CCTCGACGAG CTGGCGGCGC AGTTCAAGCT GTCGCGCTTC CATTTCGCCA AGACCTACCG CGCCCTGACC GGCCAGGCGC CGATCCAGGA CTTCATCCAG ATGAAGATGG CCCACGCCTG CCGCCTGCTC GACGAGGGCG CGCTGGAGGT ACGGCAGATC GCCGAGCAGC TCGGCTACGC CGATCCCTAT TACTTCTCGC GGCTGTTCCG CAAGGTGGTG GGCATGGCGC CCAGTCACTA CCGGGCGCTG CACCAGGGCT AG
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Protein sequence | MGFRLPSRVA VKRSVQTSAW PLPNQGVRFI TPPRLRRALA RHPLGQACYP LALGYYPEAH GHHMQRRAPD DHLLIYCRAG RGWLECADER VEVGGGDLLV LPKGLEHAYG ADPQRPWSIY WVHFEGLLAE DFLRPLGSAP RLRLGMQPRL LAEFDALLAL RRQGLSLPHF IHAAHLLQGL LTSLAVRPAR ASLKSGRVLD IDAVQALMRA HLHDSLNLDE LAAQFKLSRF HFAKTYRALT GQAPIQDFIQ MKMAHACRLL DEGALEVRQI AEQLGYADPY YFSRLFRKVV GMAPSHYRAL HQG
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