Gene PA14_54610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54610 
Symbol 
ID4385295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4840928 
End bp4841839 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID639326978 
Productputative transcriptional regulator 
Protein accessionYP_792537 
Protein GI116048663 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.53981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0153543 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGATTCA GACTGCCGAG TCGCGTCGCC GTGAAGCGTT CCGTACAGAC CTCCGCCTGG 
CCCCTGCCCA ACCAGGGGGT GCGTTTCATC ACGCCGCCCC GCCTGCGTCG CGCCCTGGCC
CGCCATCCGC TCGGCCAGGC CTGCTACCCA CTGGCCCTCG GTTACTACCC GGAGGCGCAT
GGCCACCACA TGCAGCGGCG CGCGCCGGAC GACCATCTGT TGATCTACTG CCGTGCCGGA
CGCGGCTGGC TGGAGTGCGC CGACGAGCGC GTCGAGGTCG GCGGCGGCGA CCTGCTGGTC
CTGCCCAAGG GCCTGGAACA CGCCTACGGC GCCGACCCGC AGCGGCCCTG GAGCATCTAC
TGGGTACATT TCGAAGGCCT CCTGGCGGAG GACTTCCTGC GCCCGCTGGG CAGCGCTCCG
CGCCTGCGCC TGGGCATGCA GCCGCGCCTG CTGGCGGAGT TCGACGCGCT GCTGGCGCTG
CGCCGCCAGG GCCTCAGCCT GCCGCACTTC ATCCATGCCG CGCACCTGTT GCAGGGCCTG
CTCACCTCGC TGGCGGTGCG TCCGGCGCGG GCCAGCCTGA AATCCGGGCG GGTGCTGGAC
ATCGACGCGG TGCAGGCGCT GATGCGCGCG CACCTGCACG ACAGCCTCAA CCTCGACGAG
CTGGCGGCGC AGTTCAAGCT GTCGCGCTTC CATTTCGCCA AGACCTACCG CGCCCTGACC
GGCCAGGCGC CGATCCAGGA CTTCATCCAG ATGAAGATGG CCCACGCCTG CCGCCTGCTC
GACGAGGGCG CGCTGGAGGT ACGGCAGATC GCCGAGCAGC TCGGCTACGC CGATCCCTAT
TACTTCTCGC GGCTGTTCCG CAAGGTGGTG GGCATGGCGC CCAGTCACTA CCGGGCGCTG
CACCAGGGCT AG
 
Protein sequence
MGFRLPSRVA VKRSVQTSAW PLPNQGVRFI TPPRLRRALA RHPLGQACYP LALGYYPEAH 
GHHMQRRAPD DHLLIYCRAG RGWLECADER VEVGGGDLLV LPKGLEHAYG ADPQRPWSIY
WVHFEGLLAE DFLRPLGSAP RLRLGMQPRL LAEFDALLAL RRQGLSLPHF IHAAHLLQGL
LTSLAVRPAR ASLKSGRVLD IDAVQALMRA HLHDSLNLDE LAAQFKLSRF HFAKTYRALT
GQAPIQDFIQ MKMAHACRLL DEGALEVRQI AEQLGYADPY YFSRLFRKVV GMAPSHYRAL
HQG