Gene PA14_54260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54260 
Symbol 
ID4384724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4814332 
End bp4815072 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID639326950 
Producthypothetical protein 
Protein accessionYP_792509 
Protein GI116048691 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID[TIGR00740] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGT CCGATCGCCT GTTCGCCCAA CCCCAGCAAC GTGTCGCCGA CTTCGTGTTC 
AACGAAGACG TGGTGCGCGT GTTCCCCGAC ATGATCAAGC GCTCCGTGCC GGGCTACCCC
ACCATCGTCG AGAACATCGG CGTACTCGGC GCGCAGTTCG CCCAGCCGAA CAGCGTGCTC
TACGACCTCG GCTGCTCGCT CGGCGCGGTC ACCCAGTCGC TGCGCCGCCA CGTCCGCAAC
GACGGCTGCC GGGTGATCGG GGTGGACAAC TCGCACGCGA TGATCGAGCG CTGCAGTGAA
TACCTGCATG CCCAGGACGC CATGTACCAG GAGCTGCTGC CGGTCGAGCT GATCGAGGCC
GACATTCTCG CCCTGGACCT GCAACCCACC TCGCTGGTGG CGATGAACTT CACCCTGCAG
TTCGTCGCCC CCGACCAGCG CCTCGGCCTG CTGCGCAGGA TCCGCCAGGC ACTGCTGCCC
GGCGGCGCGC TGATCCTCTC GGAGAAACTG CGCTTCGCCG ATGCGCAGGA GCACGCGCTG
CTCACCGACC TGCACATCGC CTTCAAGCGT GCCAACGGCT ACAGCGAGCT GGAGATCGCG
CAGAAGCGCA GCGCGCTGGA AAACGTCATG CTCCCCGACA CCTTCGAGGA ACACCGTGAA
CGGCTCCTGG CCGCCGGCTT CAGCCGGGTC AGCCAATGGT TCCAGTGTCT CAACTTCGCC
TCGATGATCG CCCTGCCATG A
 
Protein sequence
MSESDRLFAQ PQQRVADFVF NEDVVRVFPD MIKRSVPGYP TIVENIGVLG AQFAQPNSVL 
YDLGCSLGAV TQSLRRHVRN DGCRVIGVDN SHAMIERCSE YLHAQDAMYQ ELLPVELIEA
DILALDLQPT SLVAMNFTLQ FVAPDQRLGL LRRIRQALLP GGALILSEKL RFADAQEHAL
LTDLHIAFKR ANGYSELEIA QKRSALENVM LPDTFEEHRE RLLAAGFSRV SQWFQCLNFA
SMIALP